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| No | Name | Start | End | Size(bp) | Insertion Site | Function |
| 1 | Not named | 445282 | 582786 | 137505 | EF0479/EF0628 | Aggregation substance, possible virulence or adaptation genes, deletion of a region coding Esp and Cyl |
| No | Start | End | Size(bp) | No. of ORFs | G+C content |
No. of homologs of PAI-virulence genes | PAIs homologous to this region |
| 1 | 445282 | 582786 | 137505 | 126 | 32.82 % | 9 | Not named (Enterococcus faecalis MMH594) Not named (Enterococcus faecalis V583) |
| 2 | 2198027 | 2266655 | 68629 | 67 | 49.69 % | 1 | Not named (Enterococcus faecalis V583) Not named (Enterococcus faecium AUS0085) 89K (Streptococcus suis 05ZYH33) 89K (Streptococcus suis 98HAH33) |
| No | Start | End | Size(bp) | No. of ORFs | G+C content |
No. of homologs of PAI-virulence genes | PAIs homologous to this region |
| 1 | 296106 | 306526 | 10421 | 12 | 40.24 % | 1 | ¥ÕSa2 (Staphylococcus aureus subsp. aureus MW2) ¥ÕSa2 (Staphylococcus aureus FPR3757) ¥ÕSeq4 (Streptococcus equi 4047) |
| No | Name | Start | End | Size(bp) | Insertion Site | Function |
| 1 | Not named | 2204066 | 2258320 | 54255 | - | Similarities to the probable E. faecalis vanB vancomycin-resistance conjugative transposon Tn1549 |