Genome Information

PAthogenisity Island DataBase (PAI DB)

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Genome Information

• General information

Accession:

Strain :

Photorhabdus luminescens

Type :

Size :

G+C content :

[Note]

• PAIs (PAI reported to be located in this genome)

• cPAIs (PAI-like region overlapping genomic islands (candidate PAI))

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No	Start	End	Size(bp)	No. of ORFs	G+C content	No. of homologs of PAI-virulence genes	PAIs homologous to this region
1	372677	402222	29546	21	52.28 %	5	AGI-1 (Escherichia coli BEN2908) PAI II APEC-O1 (Escherichia coli APEC O1) macrophage toxin pathogenicity island (Photorhabdus luminescens W14)

• nPAIs (PAI-like region not overlapping genomic islands (non-probable PAI))

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No	Start	End	Size(bp)	No. of ORFs	G+C content	No. of homologs of PAI-virulence genes	PAIs homologous to this region
1	1079659	1182121	102463	61	42.92 %	15	tcd island (Photorhabdus luminescens W14) tc-PAIYe (Yersinia enterocolitica W22703)
2	1227925	1238178	10254	10	50.31 %	8	SPI-7 (Salmonella enterica Ty2) SPI-7 (Salmonella enterica subsp. enterica serovar Typhi CT18) SPI-7 (Salmonella enterica subsp. enterica serovar Typhi Ty2) YAPI (Yersinia pseudotuberculosis 32777) YAPI (Yersinia enterocolitica 8081) YAPI (Yersinia pseudotuberculosis IP 31758)
3	4414485	4465044	50560	58	41.38 %	36	TTSS locus (Photorhabdus luminescens W14)

• REIs (REI reported to be located in this genome)

• cREIs (REI-like region overlapping genomic islands (candidate REI))

*

• nREIs (REI-like region not overlapping genomic islands (non-probable REI))

*