Genome Information

PAthogenisity Island DataBase (PAI DB)

Home PAIs REIs Genomes Search Links

Genome Information

• General information

Accession:

Strain :

Burkholderia pseudomallei

Type :

Size :

G+C content :

[Note]

• PAIs (PAI reported to be located in this genome)

• cPAIs (PAI-like region overlapping genomic islands (candidate PAI))

*

No	Start	End	Size(bp)	No. of ORFs	G+C content	No. of homologs of PAI-virulence genes	PAIs homologous to this region
1	212267	230272	18006	4	59.47 %	4	tcd island (Photorhabdus luminescens W14)

• nPAIs (PAI-like region not overlapping genomic islands (non-probable PAI))

*

No	Start	End	Size(bp)	No. of ORFs	G+C content	No. of homologs of PAI-virulence genes	PAIs homologous to this region
1	587396	603394	15999	14	63.67 %	7	TTSS locus (Photorhabdus luminescens W14) Hrp PAI (Xanthomonas axonopodis 8ra) Hrp PAI (Xanthomonas oryzae MAFF 311018) Hrp PAI (Xanthomonas campestris pv. campestris str. ATCC 33913) Hrp PAI (Xanthomonas axonopodis pv. citri str. 306) Hrp PAI (Xanthomonas oryzae pv. oryzae KACC10331) Hrp PAI (Xanthomonas campestris pv. campestris str. 8004) Hrp PAI (Xanthomonas campestris pv. vesicatoria str. 85-10)
2	767162	777272	10111	12	69.92 %	10	LIM (Escherichia coli O157:H7 Sakai) SPI-1 (Salmonella typhimurium LT2) SPI-1 (Salmonella enterica subsp. enterica serovar Typhi CT18) SPI-1 (Salmonella enterica subsp. enterica serovar Typhi Ty2) SPI-1 (Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67) SSR-1 (Sodalis glossinidius ) SSR-2 (Sodalis glossinidius )
3	1956195	1985294	29100	21	64.17 %	6	SPI-6 (Salmonella enterica subsp. enterica serovar Typhi CT18)
4	2063961	2082259	18299	14	69.46 %	4	SPI-6 (Salmonella enterica subsp. enterica serovar Typhi CT18)

• REIs (REI reported to be located in this genome)

• cREIs (REI-like region overlapping genomic islands (candidate REI))

*

• nREIs (REI-like region not overlapping genomic islands (non-probable REI))

*