Genome Information

PAthogenisity Island DataBase (PAI DB)

Home PAIs REIs Genomes Search Links

Genome Information

• General information

Accession:

Strain :

Hahella chejuensis

Type :

Size :

G+C content :

[Note]

• PAIs (PAI reported to be located in this genome)

• cPAIs (PAI-like region overlapping genomic islands (candidate PAI))

*

No	Start	End	Size(bp)	No. of ORFs	G+C content	No. of homologs of PAI-virulence genes	PAIs homologous to this region
1	3356886	3369297	12412	12	53.86 %	6	LIM (Escherichia coli O157:H7 Sakai) TTSS locus (Photorhabdus luminescens W14) S-PAI (Pseudomonas cichorii Jan-83) Hrp PAI (Pseudomonas syringae DC3000) Hrp PAI (Pseudomonas syringae 61) Hrp PAI (Pseudomonas syringae pv. tomato DC3000) T-PAI (Pseudomonas viridiflava LP23.1a) T-PAI (Pseudomonas viridiflava PNA3.3a) S-PAI (Pseudomonas viridiflava RMX23.1a) S-PAI (Pseudomonas viridiflava ME3.1b) S-PAI (Pseudomonas viridiflava RMX3.1b) SPI-1 (Salmonella typhimurium LT2) SPI-1 (Salmonella enterica subsp. enterica serovar Typhi CT18) SPI-1 (Salmonella enterica subsp. enterica serovar Typhi Ty2) SPI-1 (Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67) SPI-2 (Salmonella enterica LT2) SPI-2 (Salmonella typhimurium LT2) SPI-2 (Salmonella enterica subsp. enterica serovar Typhi CT18) SPI-2 (Salmonella enterica subsp. enterica serovar Typhi Ty2) SPI-2 (Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67) SSR-1 (Sodalis glossinidius ) Hrp PAI (Xanthomonas oryzae MAFF 311018) Hrp PAI (Xanthomonas oryzae pv. oryzae KACC10331)

• nPAIs (PAI-like region not overlapping genomic islands (non-probable PAI))

*

No	Start	End	Size(bp)	No. of ORFs	G+C content	No. of homologs of PAI-virulence genes	PAIs homologous to this region
1	5262704	5271713	9010	8	56.88 %	5	TTSS locus (Photorhabdus luminescens W14)

• REIs (REI reported to be located in this genome)

• cREIs (REI-like region overlapping genomic islands (candidate REI))

*

• nREIs (REI-like region not overlapping genomic islands (non-probable REI))

*