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No | Start | End | Size(bp) | No. of ORFs | G+C content |
No. of homologs of PAI-virulence genes | PAIs homologous to this region |
1 | 1418624 | 1455484 | 36861 | 23 | 56.16 % | 12 | PAI IV APEC-O1 (Escherichia coli APEC O1) HPI (Yersinia enterocolitica WA 314) HPI (Yersinia pseudotuberculosis ) HPI (Yersinia pestis KIM6+) HPI (Yersinia pestis 6/69) HPI (Yersinia pestis CO92) HPI (Yersinia pestis KIM) HPI (Yersinia pestis biovar Medievalis str. 91001) HPI (Yersinia pseudotuberculosis IP32953) HPI (Yersinia enterocolitica 8081) |
2 | 3787840 | 3806649 | 18810 | 14 | 53.43 % | 3 | AGI-1 (Escherichia coli BEN2908) PAI II APEC-O1 (Escherichia coli APEC O1) |
No | Start | End | Size(bp) | No. of ORFs | G+C content |
No. of homologs of PAI-virulence genes | PAIs homologous to this region |
1 | 312581 | 321971 | 9391 | 7 | 52.73 % | 5 | Not named (Escherichia coli UMN026) SHI-2 (Shigella flexneri M90T) SHI-2 (Shigella flexneri 2a str. 301) SHI-2 (Shigella flexneri 2a str. 2457T) SHI-3 (Shigella boydii 0-1392) |
2 | 2387556 | 2400928 | 13373 | 10 | 45.84 % | 3 | SPI-6 (Salmonella enterica subsp. enterica serovar Typhi CT18) |
3 | 3740668 | 3762574 | 21907 | 9 | 49.16 % | 2 | HPI-2 (Yersinia pestis CO92) |
4 | 4133683 | 4154255 | 20573 | 12 | 45.18 % | 3 | tcd island (Photorhabdus luminescens W14) tc-PAIYe (Yersinia enterocolitica W22703) |
5 | 4519389 | 4537807 | 18419 | 21 | 49.13 % | 17 | LEE (Citrobacter rodentium DBS100) LEE (Escherichia coli E2348/69) LEE (Escherichia coli ATCC43895) LEE (Escherichia coli 71074) LEE (Escherichia coli 83/39) LEE (Escherichia coli RW1374) LEE (Escherichia coli RDEC-1) LEE (Escherichia coli O157:H7 EDL933) LEE (Escherichia coli O157:H7 Sakai) LEE (Escherichia coli 12009) LEE (Escherichia coli 11368) LEE (Escherichia coli 11128) LEE II (Escherichia coli 413/89-1) TTSS locus (Photorhabdus luminescens W14) SPI-2 (Salmonella enterica LT2) SPI-2 (Salmonella typhimurium LT2) SPI-2 (Salmonella enterica subsp. enterica serovar Typhi CT18) SPI-2 (Salmonella enterica subsp. enterica serovar Typhi Ty2) SPI-2 (Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67) SESS LEE (Salmonella enterica S1296) SESS LEE (Salmonella enterica S1635) Not named (Yersinia pestis CO92) |
No | Start | End | Size(bp) | No. of ORFs | G+C content |
No. of homologs of REI-resistance genes | REIs homologous to this region |
1 | 1285175 | 1295292 | 10118 | 11 | 49.03 % | 1 | tcd island (Photorhabdus luminescens W14) |
2 | 4492484 | 4503415 | 10932 | 12 | 48.83 % | 7 | TAI (Escherichia coli O157:H7 EDL933) TAI (Escherichia coli O157:H7 EDL933) Tn6060 (Pseudomonas aeruginosa 37308) |