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No | Start | End | Size(bp) | No. of ORFs | G+C content |
No. of homologs of PAI-virulence genes | PAIs homologous to this region |
1 | 1186252 | 1194735 | 8484 | 11 | 42.67 % | 4 | LEE (Escherichia coli RW1374) |
2 | 2776356 | 2794445 | 18090 | 16 | 46.97 % | 1 | BcenGI11 (Burkholderia cenocepacia J2315) LEE (Escherichia coli ATCC43895) LEE (Escherichia coli 71074) LEE (Escherichia coli O157:H7 EDL933) LEE (Escherichia coli O157:H7 Sakai) LEE (Escherichia coli 12009) AGI-3 (Escherichia coli BEN2908) TAI (Escherichia coli O157:H7 EDL933) TAI (Escherichia coli O157:H7 EDL933) OI-122 (Escherichia coli O157:H7 EDL933) PAI I CFT073 (Escherichia coli CFT073) PAI-I AL862 (Escherichia coli AL862) SRL (Shigella flexneri YSH6000) |
3 | 3142672 | 3182512 | 39841 | 54 | 39.65 % | 41 | LEE (Citrobacter rodentium DBS100) LEE (Escherichia coli E2348/69) LEE (Escherichia coli ATCC43895) LEE (Escherichia coli 71074) LEE (Escherichia coli 83/39) LEE (Escherichia coli 84/110-1) LEE (Escherichia coli RW1374) LEE (Escherichia coli RDEC-1) LEE (Escherichia coli O157:H7 EDL933) LEE (Escherichia coli O157:H7 Sakai) LEE (Escherichia coli 12009) LEE (Escherichia coli 11368) LEE (Escherichia coli 11128) LEE II (Escherichia coli 413/89-1) SESS LEE (Salmonella enterica S1296) SESS LEE (Salmonella enterica S1635) Not named (Yersinia pestis CO92) |
4 | 3339803 | 3360123 | 20321 | 10 | 45.99 % | 1 | LEE (Escherichia coli 12009) |
5 | 5218667 | 5255394 | 36728 | 38 | 51.04 % | 18 | PAI I 536 (Escherichia coli 536) PAI I CL3 (Escherichia coli CL3) PAI I APEC-O1 (Escherichia coli APEC O1) PAI I APEC-O1 (Escherichia coli APEC O1) LEE (Escherichia coli 84/110-1) LEE (Escherichia coli RW1374) LEE (Escherichia coli 12009) AGI-3 (Escherichia coli BEN2908) PAI II 536 (Escherichia coli 536) TAI (Escherichia coli O157:H7 EDL933) TAI (Escherichia coli O157:H7 EDL933) PAI III 536 (Escherichia coli 536) PAI V 536 (Escherichia coli 536) PAI II CFT073 (Escherichia coli CFT073) PAI II CFT073 (Escherichia coli CFT073) PAI-I AL862 (Escherichia coli AL862) SHI-1 (Shigella flexneri YSH6000T) SHI-1 (Shigella flexneri 2a str. 301) SHI-1 (Shigella flexneri 2a str. 2457T) SRL (Shigella flexneri YSH6000) |
No | Start | End | Size(bp) | No. of ORFs | G+C content |
No. of homologs of PAI-virulence genes | PAIs homologous to this region |
1 | 2434355 | 2448865 | 14511 | 18 | 55.99 % | 1 | Not named (Cronobacter sakazakii ATCC BAA-894) PAGI-2(C) (Pseudomonas aeruginosa C) SPI-12 (Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67) |
2 | 2917403 | 2940895 | 23493 | 16 | 53.36 % | 5 | SPI-6 (Salmonella enterica subsp. enterica serovar Typhi CT18) |
No | Start | End | Size(bp) | No. of ORFs | G+C content |
No. of homologs of REI-resistance genes | REIs homologous to this region |
1 | 2195467 | 2207680 | 12214 | 12 | 55.73 % | 1 | PAI IV APEC-O1 (Escherichia coli APEC O1) |