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No | Start | End | Size(bp) | No. of ORFs | G+C content |
No. of homologs of PAI-virulence genes | PAIs homologous to this region |
1 | 43922 | 55489 | 11568 | 17 | 45.44 % | 6 | PAI I 536 (Escherichia coli 536) LEE (Escherichia coli 84/110-1) LEE (Escherichia coli RW1374) LEE (Escherichia coli 12009) AGI-3 (Escherichia coli BEN2908) PAI II 536 (Escherichia coli 536) TAI (Escherichia coli O157:H7 EDL933) TAI (Escherichia coli O157:H7 EDL933) PAI III 536 (Escherichia coli 536) PAI V 536 (Escherichia coli 536) PAI II CFT073 (Escherichia coli CFT073) PAI-I AL862 (Escherichia coli AL862) SHI-1 (Shigella flexneri YSH6000T) SHI-1 (Shigella flexneri 2a str. 301) SHI-1 (Shigella flexneri 2a str. 2457T) SRL (Shigella flexneri YSH6000) |
2 | 909970 | 928440 | 18471 | 28 | 34.85 % | 12 | ETT2 (Escherichia coli 789) LIM (Escherichia coli O157:H7 Sakai) |
3 | 3848021 | 3882504 | 34484 | 32 | 51.76 % | 5 | AGI-1 (Escherichia coli BEN2908) PAI II APEC-O1 (Escherichia coli APEC O1) tcd island (Photorhabdus luminescens W14) |
4 | 4234082 | 4245586 | 11505 | 14 | 46.48 % | 9 | PAI I 536 (Escherichia coli 536) PAI I APEC-O1 (Escherichia coli APEC O1) PAI I APEC-O1 (Escherichia coli APEC O1) LEE (Escherichia coli RW1374) LEE (Escherichia coli 12009) AGI-3 (Escherichia coli BEN2908) PAI II 536 (Escherichia coli 536) TAI (Escherichia coli O157:H7 EDL933) TAI (Escherichia coli O157:H7 EDL933) PAI III 536 (Escherichia coli 536) PAI V 536 (Escherichia coli 536) PAI II CFT073 (Escherichia coli CFT073) PAI-I AL862 (Escherichia coli AL862) SHI-1 (Shigella flexneri YSH6000T) SHI-1 (Shigella flexneri 2a str. 301) SHI-1 (Shigella flexneri 2a str. 2457T) SRL (Shigella flexneri YSH6000) |
No | Start | End | Size(bp) | No. of ORFs | G+C content |
No. of homologs of PAI-virulence genes | PAIs homologous to this region |
1 | 758722 | 794558 | 35837 | 32 | 52.66 % | 13 | PAI I APEC-O1 (Escherichia coli APEC O1) PAI V 536 (Escherichia coli 536) |
2 | 1640204 | 1655836 | 15633 | 16 | 52.23 % | 1 | Not named (Cronobacter sakazakii ATCC BAA-894) PAGI-2(C) (Pseudomonas aeruginosa C) SPI-12 (Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67) |
No | Start | End | Size(bp) | No. of ORFs | G+C content |
No. of homologs of REI-resistance genes | REIs homologous to this region |
1 | 1887887 | 1910976 | 23090 | 20 | 47.55 % | 1 | PAI IV 536 (Escherichia coli 536) PAI IV APEC-O1 (Escherichia coli APEC O1) |
No | Start | End | Size(bp) | No. of ORFs | G+C content |
No. of homologs of REI-resistance genes | REIs homologous to this region |
1 | 4160596 | 4171816 | 11221 | 11 | 54.79 % | 1 | tcd island (Photorhabdus luminescens W14) |