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No | Start | End | Size(bp) | No. of ORFs | G+C content |
No. of homologs of PAI-virulence genes | PAIs homologous to this region |
1 | 884706 | 896227 | 11522 | 18 | 36.67 % | 3 | LIM (Escherichia coli O157:H7 Sakai) |
2 | 1800112 | 1834587 | 34476 | 30 | 49.13 % | 5 | PAI I APEC-O1 (Escherichia coli APEC O1) PAI I APEC-O1 (Escherichia coli APEC O1) LEE (Escherichia coli RW1374) LEE (Escherichia coli 12009) AGI-3 (Escherichia coli BEN2908) PAI II 536 (Escherichia coli 536) TAI (Escherichia coli O157:H7 EDL933) PAI III 536 (Escherichia coli 536) PAI IV 536 (Escherichia coli 536) PAI V 536 (Escherichia coli 536) PAI II CFT073 (Escherichia coli CFT073) PAI II CFT073 (Escherichia coli CFT073) PAI-I AL862 (Escherichia coli AL862) PAI IV APEC-O1 (Escherichia coli APEC O1) SHI-1 (Shigella flexneri YSH6000T) SHI-1 (Shigella flexneri 2a str. 301) SHI-1 (Shigella flexneri 2a str. 2457T) SRL (Shigella flexneri YSH6000) |
3 | 3994581 | 4003115 | 8535 | 8 | 56.82 % | 7 | SRL (Shigella flexneri YSH6000) |
No | Start | End | Size(bp) | No. of ORFs | G+C content |
No. of homologs of PAI-virulence genes | PAIs homologous to this region |
1 | 753584 | 773397 | 19814 | 15 | 52.28 % | 5 | PAI V 536 (Escherichia coli 536) |
2 | 802128 | 813598 | 11471 | 10 | 50.97 % | 1 | tcd island (Photorhabdus luminescens W14) |
3 | 1579221 | 1596227 | 17007 | 17 | 52.24 % | 1 | Not named (Cronobacter sakazakii ATCC BAA-894) PAGI-2(C) (Pseudomonas aeruginosa C) SPI-12 (Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67) |
No | Start | End | Size(bp) | No. of ORFs | G+C content |
No. of homologs of REI-resistance genes | REIs homologous to this region |
1 | 4006342 | 4017055 | 10714 | 10 | 46.01 % | 1 | PAI I APEC-O1 (Escherichia coli APEC O1) PAI I APEC-O1 (Escherichia coli APEC O1) AGI-3 (Escherichia coli BEN2908) |