Home PAIs REIs Genomes Search Links |
|
No | Start | End | Size(bp) | No. of ORFs | G+C content |
No. of homologs of PAI-virulence genes | PAIs homologous to this region |
1 | 908012 | 936019 | 28008 | 10 | 44.82 % | 9 | SPI-4 (Salmonella enterica LT2) SPI-4 (Salmonella enterica ST4/74) SPI-4 (Salmonella typhimurium LT2) SPI-4 (Salmonella enterica subsp. enterica serovar Typhi CT18) SPI-4 (Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67) |
2 | 1583262 | 1625064 | 41803 | 37 | 54.36 % | 6 | tcd island (Photorhabdus luminescens W14) SPI-6 (Salmonella enterica subsp. enterica serovar Typhi CT18) |
3 | 1630640 | 1639769 | 9130 | 9 | 47.65 % | 3 | SPI-6 (Salmonella enterica subsp. enterica serovar Typhi CT18) |
4 | 2420691 | 2441687 | 20997 | 22 | 50.55 % | 9 | tcd island (Photorhabdus luminescens W14) SPI-5 (Salmonella enterica 2229) SPI-5 (Salmonella typhimurium LT2) SPI-5 (Salmonella enterica subsp. enterica serovar Typhi CT18) SPI-5 (Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67) |
5 | 2571983 | 2580289 | 8307 | 9 | 40.95 % | 2 | SPI-11 (Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67) |
6 | 2706540 | 2748424 | 41885 | 47 | 47.53 % | 44 | LEE (Citrobacter rodentium DBS100) LEE (Escherichia coli E2348/69) LEE (Escherichia coli ATCC43895) LEE (Escherichia coli 71074) LEE (Escherichia coli 83/39) LEE (Escherichia coli RW1374) LEE (Escherichia coli RDEC-1) LEE (Escherichia coli O157:H7 EDL933) LEE (Escherichia coli O157:H7 Sakai) LEE (Escherichia coli 12009) LEE (Escherichia coli 11368) LEE (Escherichia coli 11128) LEE II (Escherichia coli 413/89-1) SPI-2 (Salmonella enterica LT2) SPI-2 (Salmonella enterica SL1344) SPI-2 (Salmonella typhimurium LT2) SPI-2 (Salmonella enterica subsp. enterica serovar Typhi CT18) SPI-2 (Salmonella enterica subsp. enterica serovar Typhi Ty2) SPI-2 (Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67) SESS LEE (Salmonella enterica S1296) SESS LEE (Salmonella enterica S1635) Not named (Yersinia pestis CO92) |
7 | 3630999 | 3640741 | 9743 | 12 | 60.46 % | 1 | PAGI-2(C) (Pseudomonas aeruginosa C) SPI-12 (Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67) |
8 | 4172165 | 4181551 | 9387 | 5 | 56.49 % | 5 | PAI III 536 (Escherichia coli 536) |
9 | 4261633 | 4305910 | 44278 | 49 | 45.36 % | 37 | LIM (Escherichia coli O157:H7 Sakai) TTSS locus (Photorhabdus luminescens W14) SPI-1 (Salmonella typhimurium LT2) SPI-1 (Salmonella enterica subsp. enterica serovar Typhi CT18) SPI-1 (Salmonella enterica subsp. enterica serovar Typhi Ty2) SPI-1 (Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67) centisome 63 pathogenicity island (Salmonella enterica SL1344) SSR-1 (Sodalis glossinidius ) SSR-2 (Sodalis glossinidius ) |
No | Start | End | Size(bp) | No. of ORFs | G+C content |
No. of homologs of PAI-virulence genes | PAIs homologous to this region |
1 | 432020 | 450038 | 18019 | 15 | 47.73 % | 9 | SPI-3 (Salmonella enterica 14028s) SPI-3 (Salmonella typhimurium LT2) SPI-3 (Salmonella enterica subsp. enterica serovar Typhi CT18) SPI-3 (Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67) |
2 | 3914669 | 3937880 | 23212 | 5 | 57.02 % | 5 | CS54 island (Salmonella enterica ATCC14028) |
No | Start | End | Size(bp) | No. of ORFs | G+C content |
No. of homologs of REI-resistance genes | REIs homologous to this region |
1 | 3378386 | 3386764 | 8379 | 10 | 52.25 % | 1 | PAI IV APEC-O1 (Escherichia coli APEC O1) |