Home PAIs REIs Genomes Search Links
|
|
Home PAIs REIs Genomes Search Links |
|
|
Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Vibrio cholerae N16961 (NC_002505) Location : 1892430 - 1954129 bp Size : 61700 bp GC content : 42.8 % GC bias (=GCregion - GCgenome) : -4.86 % |
| No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
| 1 | NA | NP_231393.1 | 1892430-1895480 | 3051 | + | AcrB/AcrD/AcrF family transporter | Resistance |
| 2 | tRNA-Ser | - | 1895692-1895779 | 88 | + | tRNA-Ser | - |
| 3 | NA | NP_231394.1 | 1896092-1897327 | 1236 | + | phage family integrase | - |
| 4 | NA | - | 1897402-1897878 | 477 | + | - | - |
| 5 | NA | - | 1898009-1901459 | 3451 | - | - | - |
| 6 | NA | NP_231397.1 | 1901450-1902901 | 1452 | - | hypothetical protein | Virulence |
| 7 | NA | NP_231398.1 | 1902898-1903632 | 735 | - | chemotaxis protein MotB-like protein | Virulence |
| 8 | NA | NP_231399.1 | 1903625-1905745 | 2121 | - | hypothetical protein | Virulence |
| 9 | NA | NP_231400.1 | 1905790-1908858 | 3069 | - | type I restriction enzyme HsdR | Virulence |
| 10 | NA | NP_231401.1 | 1908886-1910877 | 1992 | - | hypothetical protein | Virulence |
| 11 | NA | NP_231402.1 | 1910870-1912282 | 1413 | - | hypothetical protein | Virulence |
| 12 | NA | NP_231403.1 | 1912283-1913671 | 1389 | - | hypothetical protein | Virulence |
| 13 | NA | NP_231404.1 | 1913628-1916009 | 2382 | - | DNA methylase HsdM | Virulence |
| 14 | NA | NP_231405.1 | 1916150-1918213 | 2064 | - | hypothetical protein | Virulence |
| 15 | NA | NP_231406.1 | 1918195-1921857 | 3663 | - | hypothetical protein | Virulence |
| 16 | NA | NP_231407.1 | 1921885-1922745 | 861 | + | hypothetical protein | Virulence |
| 17 | NA | NP_231408.1 | 1922810-1923880 | 1071 | - | hypothetical protein | Virulence |
| 18 | NA | NP_231409.1 | 1923895-1925049 | 1155 | - | N-acetylneuraminic acid mutarotase | Virulence |
| 19 | NA | NP_231410.1 | 1925231-1926067 | 837 | - | hypothetical protein | Virulence |
| 20 | NA | NP_231411.1 | 1926196-1927092 | 897 | - | N-acetylneuraminate lyase | Virulence |
| 21 | NA | NP_231412.1 | 1927130-1928413 | 1284 | - | hypothetical protein | Virulence |
| 22 | NA | NP_231413.1 | 1928421-1928942 | 522 | - | hypothetical protein | Virulence |
| 23 | NA | NP_231414.1 | 1928993-1929958 | 966 | - | C4-dicarboxylate-binding protein | Virulence |
| 24 | NA | NP_231415.1 | 1929989-1930282 | 294 | + | hypothetical protein | Virulence |
| 25 | NA | NP_231416.1 | 1930173-1930895 | 723 | + | N-acetylmannosamine-6-phosphate 2-epimerase | Virulence |
| 26 | NA | NP_231417.1 | 1930883-1931746 | 864 | + | N-acetylmannosamine kinase | Virulence |
| 27 | NA | NP_231418.1 | 1931750-1932886 | 1137 | + | N-acetylglucosamine-6-phosphate deacetylase | Virulence |
| 28 | NA | NP_231419.1 | 1933231-1935654 | 2424 | + | neuraminidase | Virulence |
| 29 | NA | NP_231420.1 | 1935801-1936007 | 207 | - | transcriptional regulator | Virulence |
| 30 | NA | NP_231421.1 | 1936121-1936597 | 477 | + | DNA repair protein RadC | Virulence |
| 31 | NA | NP_231423.1 | 1936827-1937522 | 696 | - | hypothetical protein | Virulence |
| 32 | NA | NP_231424.1 | 1937519-1938391 | 873 | - | transposase OrfAB subunit B | - |
| 33 | NA | NP_231425.1 | 1938388-1938732 | 345 | - | transposase OrfAB subunit A | - |
| 34 | NA | NP_231426.1 | 1938739-1939779 | 1041 | - | hypothetical protein | Virulence |
| 35 | NA | NP_231427.1 | 1939914-1940273 | 360 | - | hypothetical protein | Virulence |
| 36 | NA | NP_231428.1 | 1940322-1940699 | 378 | - | hypothetical protein | Virulence |
| 37 | NA | NP_231429.1 | 1940754-1941332 | 579 | - | hypothetical protein | Virulence |
| 38 | NA | NP_231430.1 | 1941351-1941671 | 321 | - | transcriptional regulator | Virulence |
| 39 | NA | NP_231431.1 | 1941658-1942032 | 375 | - | middle operon regulator-like protein | Virulence |
| 40 | NA | NP_231432.1 | 1942842-1943303 | 462 | - | hypothetical protein | Virulence |
| 41 | NA | NP_231433.1 | 1943306-1944457 | 1152 | - | eha protein | Virulence |
| 42 | NA | NP_231434.1 | 1944387-1946144 | 1758 | - | hypothetical protein | Virulence |
| 43 | NA | NP_231435.1 | 1946151-1947122 | 972 | - | hypothetical protein | Virulence |
| 44 | NA | NP_231436.1 | 1947461-1947823 | 363 | - | hypothetical protein | Virulence |
| 45 | NA | NP_231437.1 | 1947786-1948022 | 237 | - | hypothetical protein | Virulence |
| 46 | NA | NP_231438.1 | 1948112-1948573 | 462 | + | hypothetical protein | Virulence |
| 47 | NA | NP_231439.1 | 1948800-1949114 | 315 | + | hypothetical protein | Virulence |
| 48 | NA | NP_231440.1 | 1949165-1949611 | 447 | + | hypothetical protein | Virulence |
| 49 | NA | NP_231441.1 | 1949718-1950704 | 987 | + | hypothetical protein | Virulence |
| 50 | NA | - | 1950739-1951379 | 641 | - | - | - |
| 51 | NA | NP_231442.1 | 1951671-1952516 | 846 | + | hypothetical protein | Virulence |
| 52 | NA | NP_231443.1 | 1952631-1952861 | 231 | - | transcriptional regulator | Virulence |
| 53 | NA | NP_231444.1 | 1953461-1953664 | 204 | + | hypothetical protein | - |
| 54 | NA | NP_231445.1 | 1953656-1954129 | 474 | - | hypothetical protein | - |