PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Yersinia pestis CO92 (NC_003143)
Location : 4098633 - 4119215 bp
Size : 20583 bp
GC content : 45.2 %
GC bias (=GCregion - GCgenome) : -2.47 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1NA YP_002348559.1 4098633-4101491 2859 - insecticidal toxinVirulence
2NA YP_002348560.1 4101516-4104551 3036 - insecticidal toxinVirulence
3NA YP_002348561.1 4104548-4104907 360 - hypothetical protein-
4NA YP_002348562.1 4104904-4105305 402 - hypothetical protein-
5NA YP_002348563.1 4105318-4105620 303 - hypothetical protein-
6tcaC YP_002348564.1 4105754-4110244 4491 - insecticidal toxin complexVirulence
7tcaB - 4110301-4113893 3593 - --
8NA YP_002348565.1 4113934-4116435 2502 - insecticial toxin-
9NA YP_002348566.1 4116671-4117537 867 - LysR family transcriptional regulator-
10NA YP_002348567.1 4117798-4118709 912 - DNA-binding transcriptional regulator-
11NA YP_002348568.1 4119012-4119215 204 + hypothetical protein-


PI: Yer.3tccC tccC - - - tcaC tcaR2 tcaR1 - PI: Pho.1TccC2 TccC3 TccC4 TccC5 TccC3 tchA tcdB1 tcdB2

• PAIs homologous to this region

tcd island (Photorhabdus luminescens W14)
tc-PAIYe (Yersinia enterocolitica W22703)