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Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Salmonella enterica LT2 (NC_003197) Location : 3005842 - 3050120 bp Size : 44279 bp GC content : 45.4 % GC bias (=GCregion - GCgenome) : -6.86 % |
No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
1 | ygbA | NP_461781.1 | 3005842-3006186 | 345 | - | hypothetical protein | - |
2 | sitA | NP_461782.1 | 3006368-3007285 | 918 | + | periplasmic binding protein | Virulence |
3 | sitB | NP_461783.1 | 3007282-3008103 | 822 | + | ATP-binding protein | Virulence |
4 | sitC | NP_461784.1 | 3008100-3008960 | 861 | + | permease | Virulence |
5 | sitD | NP_461785.1 | 3008951-3009799 | 849 | + | permease | Virulence |
6 | avrA | NP_461786.1 | 3009898-3010806 | 909 | - | secreted effector protein | Virulence |
7 | sprB | NP_461787.1 | 3010967-3011722 | 756 | - | transcriptional regulator | Virulence |
8 | hilC | NP_461788.1 | 3012107-3012994 | 888 | - | invasion regulatory protein | Virulence |
9 | orgC | NP_461789.1 | 3013339-3013791 | 453 | - | hypothetical protein | - |
10 | orgB | NP_461790.1 | 3013788-3014468 | 681 | - | needle complex export protein | Virulence |
11 | orgA | NP_461791.1 | 3014425-3015024 | 600 | - | needle complex assembly protein | Virulence |
12 | prgK | NP_461792.1 | 3014996-3015754 | 759 | - | needle complex inner membrane lipoprotein | Virulence |
13 | prgJ | NP_461793.1 | 3015751-3016056 | 306 | - | needle complex minor subunit | Virulence |
14 | prgI | NP_461794.1 | 3016075-3016317 | 243 | - | needle complex major subunit | Virulence |
15 | prgH | NP_461795.1 | 3016342-3017520 | 1179 | - | needle complex inner membrane protein | Virulence |
16 | hilD | NP_461796.1 | 3017836-3018765 | 930 | + | invasion protein regulatory protein | Virulence |
17 | hilA | NP_461797.1 | 3019856-3021517 | 1662 | + | invasion protein regulator | Virulence |
18 | iagB | NP_461798.1 | 3021535-3022017 | 483 | + | invasion protein precursor | Virulence |
19 | sptP | NP_461799.1 | 3022071-3023702 | 1632 | - | protein tyrosine phosphatase/GTPase activating protein | Virulence |
20 | sicP | NP_461800.1 | 3023689-3024081 | 393 | - | secretion chaperone | Virulence |
21 | NA | YP_006892404.1 | 3024108-3024332 | 225 | - | hypothetical protein | - |
22 | iacP | NP_461802.1 | 3024412-3024660 | 249 | - | acyl carrier protein | Virulence |
23 | sipA | NP_461803.1 | 3024679-3026736 | 2058 | - | secreted effector protein | Virulence |
24 | sipD | NP_461804.1 | 3026755-3027786 | 1032 | - | translocation machinery component | Virulence |
25 | sipC | NP_461805.1 | 3027857-3029086 | 1230 | - | translocation machinery component | Virulence |
26 | sipB | NP_461806.1 | 3029114-3030895 | 1782 | - | translocation machinery component | Virulence |
27 | sicA | NP_461807.1 | 3030898-3031395 | 498 | - | secretion chaperone | Virulence |
28 | spaS | NP_461808.1 | 3031533-3032603 | 1071 | - | surface presentation of antigens protein SpaS | Virulence |
29 | spaR | NP_461809.1 | 3032590-3033381 | 792 | - | needle complex export protein | Virulence |
30 | spaQ | NP_461810.1 | 3033385-3033645 | 261 | - | needle complex export protein | Virulence |
31 | spaP | NP_461811.1 | 3033671-3034345 | 675 | - | surface presentation of antigens protein SpaP | Virulence |
32 | spaO | NP_461812.1 | 3034335-3035246 | 912 | - | surface presentation of antigens protein SpaO | Virulence |
33 | invJ | NP_461813.1 | 3035246-3036256 | 1011 | - | needle length control protein | Virulence |
34 | invI | NP_461814.1 | 3036256-3036699 | 444 | - | needle complex assembly protein | Virulence |
35 | invC | NP_461815.1 | 3036677-3037972 | 1296 | - | ATP synthase SpaL | Virulence |
36 | invB | NP_461816.1 | 3037969-3038376 | 408 | - | secretion chaperone | Virulence |
37 | invA | NP_461817.1 | 3038400-3040457 | 2058 | - | needle complex export protein | Virulence |
38 | invE | NP_461818.1 | 3040482-3041600 | 1119 | - | invasion protein | Virulence |
39 | invG | NP_461819.1 | 3041597-3043285 | 1689 | - | outer membrane secretin precursor | Virulence |
40 | invF | NP_461820.1 | 3043282-3043932 | 651 | - | invasion regulatory protein | Virulence |
41 | invH | NP_461821.1 | 3044389-3044832 | 444 | + | needle complex outer membrane lipoprotein precursor | Virulence |
42 | NA | NP_461822.1 | 3045263-3045712 | 450 | + | hypothetical protein | - |
43 | NA | NP_461823.1 | 3045697-3046044 | 348 | + | hypothetical protein | - |
44 | NA | NP_461824.1 | 3046317-3046643 | 327 | - | hypothetical protein | - |
45 | NA | NP_461825.1 | 3047332-3047622 | 291 | + | ABC-type transporter | - |
46 | NA | NP_461826.1 | 3047619-3048146 | 528 | + | acetyltransferase | - |
47 | NA | - | 3048219-3048411 | 193 | - | - | - |
48 | pphB | NP_461828.1 | 3048771-3049427 | 657 | + | serine/threonine-specific protein phosphatase 2 | - |
49 | NA | NP_461829.1 | 3049599-3050120 | 522 | - | hypothetical protein | - |