Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Salmonella enterica CT18 (NC_003198) Location : 292653 - 360757 bp Size : 68105 bp GC content : 51.4 % GC bias (=GCregion - GCgenome) : -0.65 % |
No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
1 | tRNA-Asp | - | 292653-292729 | 77 | + | tRNA-Asp | - |
2 | yafB | NP_454858.1 | 292894-293697 | 804 | + | hypothetical oxidoreductase | - |
3 | yafC | NP_454859.1 | 293718-294632 | 915 | - | hypothetical transcriptional regulator | - |
4 | STY0278 | NP_454860.1 | 294737-295912 | 1176 | + | putative drug efflux protein | - |
5 | STY0279 | NP_454861.1 | 296065-296844 | 780 | + | conserved hypothetical protein | - |
6 | yafE | NP_454862.1 | 296922-297692 | 771 | + | putative methyltransferase | - |
7 | mltD | NP_454863.1 | 297748-299115 | 1368 | - | membrane-bound lytic murein transglycosylase d precursor | - |
8 | gloB | NP_454864.1 | 299187-299942 | 756 | - | probable hydroxyacylglutathione hydrolase | - |
9 | STY0283 | NP_454865.1 | 299977-300699 | 723 | + | conserved hypothetical protein | - |
10 | STY0284 | NP_454866.1 | 300696-301163 | 468 | - | ribonuclease H | - |
11 | STY0285 | NP_454867.1 | 301227-301958 | 732 | + | DNA polymerase III epsilon subunit | - |
12 | tRNA-Asp | - | 302092-302168 | 77 | + | tRNA-Asp | - |
13 | STY0286 | NP_454868.1 | 302488-303120 | 633 | - | hypothetical protein | - |
14 | STY0287 | NP_454869.1 | 303120-303542 | 423 | - | hypothetical protein | - |
15 | STY0288 | NP_454870.1 | 303553-304548 | 996 | - | hypothetical protein | - |
16 | STY0289 | NP_454871.1 | 304545-306428 | 1884 | - | hypothetical protein | Virulence |
17 | STY0290 | NP_454872.1 | 306444-306938 | 495 | - | conserved hypothetical protein | - |
18 | STY0291 | NP_454873.1 | 306935-307759 | 825 | - | hypothetical protein | - |
19 | STY0292 | NP_454874.1 | 307746-308648 | 903 | - | hypothetical protein | - |
20 | STY0293 | NP_454875.1 | 308657-308728 | 72 | - | hypothetical protein | - |
21 | STY0294 | NP_454876.1 | 309016-311679 | 2664 | + | ClpB-like protein | Virulence |
22 | STY0295 | NP_454877.1 | 311664-311762 | 99 | + | hypothetical protein | - |
23 | STY0296 | NP_454878.1 | 311765-312055 | 291 | + | hypothetical protein | - |
24 | STY0297 | NP_454879.1 | 312119-312661 | 543 | + | conserved hypothetical protein | Virulence |
25 | STY0298 | - | 312685-314193 | 1509 | + | conserved hypothetical protein (pseudogene) | - |
26 | STY0300 | NP_454880.1 | 314246-314647 | 402 | + | hypothetical protein | - |
27 | STY0301 | NP_454881.1 | 314619-315044 | 426 | + | hypothetical protein | - |
28 | STY0302 | NP_454882.1 | 315281-315766 | 486 | + | conserved hypothetical protein | Virulence |
29 | STY0303 | NP_454883.1 | 315833-316369 | 537 | + | probable lipoprotein | - |
30 | STY0304 | NP_454884.1 | 316373-317716 | 1344 | + | conserved hypothetical protein | - |
31 | STY0305 | NP_454885.1 | 317713-319014 | 1302 | + | putative membrane protein | - |
32 | STY0306 | NP_454886.1 | 319019-319768 | 750 | + | putative membrane protein | - |
33 | STY0307 | NP_454887.1 | 319800-320294 | 495 | + | hypothetical protein | - |
34 | STY0308 | - | 320531-324392 | 3862 | + | probable IcmF-related integral membrane ATP-binding protein (pseudogene) | - |
35 | STY0310 | NP_454888.1 | 324392-325159 | 768 | + | hypothetical protein | - |
36 | STY0311 | NP_454889.1 | 325202-325672 | 471 | + | hypothetical protein | - |
37 | STY0312 | NP_454890.1 | 325657-326130 | 474 | + | probable secreted protein | - |
38 | STY0313 | NP_454891.1 | 326234-326704 | 471 | + | hypothetical protein | - |
39 | STY0314 | NP_454892.1 | 326689-327150 | 462 | + | probable secreted protein | - |
40 | STY0316 | NP_454893.1 | 327278-327694 | 417 | + | probable secreted protein | - |
41 | STY0317 | NP_454894.1 | 327721-328158 | 438 | + | hypothetical protein | - |
42 | STY0318 | NP_454895.1 | 328166-328273 | 108 | + | hypothetical protein | - |
43 | STY0319 | NP_454896.1 | 328636-330825 | 2190 | + | Rhs-family protein | - |
44 | STY0320 | NP_454897.1 | 330849-331295 | 447 | + | hypothetical protein | - |
45 | STY0321 | NP_454898.1 | 331314-335378 | 4065 | + | Rhs-family protein | - |
46 | STY0322 | NP_454899.1 | 335381-336058 | 678 | + | hypothetical protein | - |
47 | STY0323 | NP_454900.1 | 336077-336370 | 294 | + | hypothetical protein | - |
48 | STY0324 | NP_454901.1 | 336466-338997 | 2532 | + | Rhs-family protein | - |
49 | STY0326 | NP_454902.1 | 339076-339336 | 261 | + | conserved hypothetical protein | - |
50 | STY0327 | NP_454903.1 | 339338-339781 | 444 | + | hypothetical protein | - |
51 | STY0328 | NP_454904.1 | 339851-340156 | 306 | - | hypothetical protein | - |
52 | STY0329 | - | 340209-340913 | 705 | + | IS element transposase (pseudogene) | - |
53 | safA | NP_454905.1 | 341669-342163 | 495 | + | probable lipoprotein | - |
54 | safE | - | 342296-342794 | 499 | + | probable lipoprotein (pseudogene) | - |
55 | safB | NP_454906.1 | 342869-343609 | 741 | + | periplasmic fimbrial chaperone protein | Virulence |
56 | safC | NP_454907.1 | 343633-346143 | 2511 | + | outer-membrane fimbrial usher protein | Virulence |
57 | safD | NP_454908.1 | 346165-346635 | 471 | + | putative fimbrial structural subunit | - |
58 | STY0338 | NP_454909.1 | 347043-347864 | 822 | + | conserved hypothetical protein | Virulence |
59 | STY0339 | - | 348345-348476 | 132 | + | probable transposase remnant (pseudogene) | - |
60 | sinR | NP_454910.1 | 348682-349626 | 945 | + | LysR-family transcriptional regulator SinR | - |
61 | STY0342 | NP_454911.1 | 349746-349859 | 114 | + | hypothetical protein | - |
62 | STY0343 | - | 349946-350113 | 168 | + | probable transposase remnant (pseudogene) | - |
63 | STY0344 | - | 350172-350549 | 378 | - | probable transposase remnant (pseudogene) | - |
64 | tcfA | NP_454912.1 | 351764-352474 | 711 | + | putative fimbrial protein | - |
65 | tcfB | NP_454913.1 | 352525-353100 | 576 | + | putative fimbrial subunit | Virulence |
66 | tsaC | NP_454914.1 | 353209-355896 | 2688 | + | outer membrane fimbrial usher protein | - |
67 | tcfD | NP_454915.1 | 355919-356998 | 1080 | + | putative fimbrail protein | - |
68 | tinR | NP_454916.1 | 357131-357586 | 456 | + | transcriptional regulator | - |
69 | STY0350 | NP_454917.1 | 357726-358343 | 618 | + | hypothetical protein | - |
70 | STY0351 | NP_454918.1 | 359306-360025 | 720 | - | possible outer membrane adhesin | - |
71 | STY0352 | NP_454919.1 | 360350-360757 | 408 | - | probable secreted protein | - |