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Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Salmonella enterica CT18 (NC_003198) Location : 4683605 - 4716538 bp Size : 32934 bp GC content : 46.6 % GC bias (=GCregion - GCgenome) : -5.48 % |
No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
1 | tRNA-Leu | - | 4683605-4683689 | 85 | + | tRNA-Leu | - |
2 | STY4821 | NP_458899.1 | 4683853-4685118 | 1266 | + | integrase | - |
3 | STY4822 | NP_458900.1 | 4685181-4686257 | 1077 | - | protein kinase | - |
4 | STY4823 | NP_458901.1 | 4686254-4687327 | 1074 | - | protein kinase | - |
5 | STY4824 | NP_458902.1 | 4687302-4688465 | 1164 | - | hypothetical protein | - |
6 | STY4825 | NP_458903.1 | 4688741-4689307 | 567 | - | phage polarity suppression protein | - |
7 | STY4826 | NP_458904.1 | 4689323-4689562 | 240 | - | bacteriophage gene regulatory protein | - |
8 | STY4827 | NP_458905.1 | 4689566-4690426 | 861 | - | putative phage capsid protein | - |
9 | STY4828 | NP_458906.1 | 4690849-4691172 | 324 | + | phage DNA binding protein | - |
10 | cI | NP_458907.1 | 4691273-4691656 | 384 | + | phage immunity repressor protein | - |
11 | STY4830 | NP_458908.1 | 4691653-4691880 | 228 | + | hypothetical protein | - |
12 | STY4831 | NP_458909.1 | 4691877-4692197 | 321 | + | hypothetical P4 phage protein | - |
13 | STY4832 | NP_458910.1 | 4692212-4694545 | 2334 | + | Bacteriophage P4 DNA primase | - |
14 | STY4833 | NP_458911.1 | 4694767-4694907 | 141 | + | hypothetical protein | - |
15 | STY4834 | NP_458912.1 | 4694997-4695146 | 150 | + | hypothetical secreted protein | - |
16 | STY4835 | - | 4695457-4696511 | 1055 | - | putative transposase for insertion sequence (pseudogene) | - |
17 | sefA | - | 4696958-4697451 | 494 | + | fimbrial protein precursor (pseudogene) | - |
18 | sefB | NP_458913.1 | 4697576-4698328 | 753 | + | fimbrial chaperone protein | Virulence |
19 | sefC | NP_458914.1 | 4698333-4700849 | 2517 | + | outer membrane fimbrial usher protein | Virulence |
20 | NA | - | 4699231-4699318 | 88 | + | - | - |
21 | STY4839 | - | 4700846-4701288 | 443 | + | putative fimbrial protein (pseudogene) | Virulence |
22 | sefR | - | 4701328-4702139 | 812 | - | putative activator protein SefR (pseudogene) | Virulence |
23 | STY4842 | NP_458915.1 | 4702716-4702925 | 210 | + | probable regulatory protein | - |
24 | STY4843 | NP_458916.1 | 4702910-4703260 | 351 | + | putative gerE-family regulatory protein | - |
25 | STY4845 | - | 4703505-4704156 | 652 | + | thiol:disulfide interchange protein (pseudogene) | - |
26 | STY4846 | NP_458917.1 | 4704346-4705191 | 846 | + | putative outer membrane protein | - |
27 | STY4848 | - | 4705454-4706288 | 835 | + | putative transposase (pseudogene) | - |
28 | STY4849 | NP_458918.1 | 4706399-4710148 | 3750 | - | helicase related protein | - |
29 | STY4850 | NP_458919.1 | 4710186-4712723 | 2538 | - | DEAD-box helicase-related protein | - |
30 | STY4851 | NP_458920.1 | 4712736-4716035 | 3300 | - | conserved hypothetical protein | - |
31 | STY4852 | NP_458921.1 | 4716299-4716538 | 240 | + | hypothetical protein | - |