PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Yersinia pestis KIM (NC_004088)
Location : 184075 - 204658 bp
Size : 20584 bp
GC content : 45.2 %
GC bias (=GCregion - GCgenome) : -2.48 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1NA NP_667522.1 184075-184278 204 - hypothetical protein-
2NA NP_667523.1 184581-185492 912 + DNA-binding transcriptional regulator-
3NA NP_667524.1 185744-186619 876 + transcriptional regulator-
4NA NP_667525.1 186780-186941 162 - hypothetical protein-
5tcaA1 NP_667526.1 187032-189356 2325 + toxin subunit-
6tcbA NP_667527.1 189397-192990 3594 + toxin subunit-
7tcaC1 NP_667528.1 192987-197537 4551 + insecticidal toxin complexVirulence
8NA NP_667529.1 197671-197973 303 + hypothetical protein-
9NA NP_667530.1 197977-198387 411 + hypothetical protein-
10NA NP_667531.1 198375-198743 369 + hypothetical protein-
11NA NP_667532.1 198730-198903 174 + hypothetical protein-
12tccC1 NP_667533.1 198944-201775 2832 + toxin subunitVirulence
13tccC2 NP_667534.1 201800-204658 2859 + toxin subunitVirulence