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Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Escherichia coli CFT073 (NC_004431) Location : 4910097 - 4971660 bp Size : 61564 bp GC content : 47.3 % GC bias (=GCregion - GCgenome) : -3.15 % |
No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
1 | lysS | NP_756986.2 | 4910097-4911614 | 1518 | - | lysyl-tRNA synthetase | Virulence |
2 | yjdL | NP_756987.1 | 4911851-4913308 | 1458 | - | transporter YjdL | - |
3 | cadA | NP_756988.1 | 4913367-4915520 | 2154 | - | lysine decarboxylase, inducible | Virulence |
4 | cadB | NP_756989.1 | 4915594-4916928 | 1335 | - | lysine/cadaverine antiporter | Virulence |
5 | cadC | NP_756990.1 | 4917294-4918832 | 1539 | - | DNA-binding transcriptional activator CadC | - |
6 | NA | NP_756991.1 | 4919569-4919811 | 243 | - | hypothetical protein | - |
7 | NA | NP_756992.1 | 4920004-4921503 | 1500 | + | hypothetical protein | - |
8 | NA | NP_756993.1 | 4921500-4922255 | 756 | + | hypothetical protein | - |
9 | NA | NP_756994.1 | 4922315-4922839 | 525 | - | hypothetical protein | Virulence |
10 | NA | NP_756995.1 | 4922924-4923121 | 198 | - | hypothetical protein | Virulence |
11 | NA | NP_756996.1 | 4923133-4923621 | 489 | - | hypothetical protein | Virulence |
12 | NA | NP_756997.1 | 4923618-4923995 | 378 | - | hypothetical protein | Virulence |
13 | NA | NP_756998.1 | 4924085-4924513 | 429 | - | hypothetical protein | Virulence |
14 | NA | NP_756999.1 | 4924532-4924753 | 222 | - | hypothetical protein | Virulence |
15 | NA | NP_757000.1 | 4924822-4925298 | 477 | - | radC-like protein yeeS | Virulence |
16 | NA | NP_757001.1 | 4924834-4925364 | 531 | + | hypothetical protein | - |
17 | NA | NP_757002.1 | 4925298-4925744 | 447 | + | hypothetical protein | - |
18 | NA | NP_757003.1 | 4925313-4925798 | 486 | - | hypothetical protein | Virulence |
19 | NA | NP_757004.1 | 4925889-4926707 | 819 | - | hypothetical protein | Virulence |
20 | NA | NP_757005.1 | 4926797-4927030 | 234 | - | hypothetical protein | Virulence |
21 | NA | NP_757006.1 | 4927036-4927818 | 783 | - | hypothetical protein | Virulence |
22 | NA | NP_757007.1 | 4927846-4927977 | 132 | + | hypothetical protein | - |
23 | NA | NP_757008.1 | 4927861-4928541 | 681 | - | transcriptional regulator YfjR | Virulence |
24 | NA | NP_757009.1 | 4928570-4928725 | 156 | - | hypothetical protein | - |
25 | NA | NP_757010.1 | 4928744-4929628 | 885 | - | hypothetical protein | Virulence |
26 | NA | NP_757011.1 | 4929731-4930684 | 954 | + | hypothetical protein | - |
27 | NA | NP_757012.1 | 4930681-4931556 | 876 | - | hypothetical protein | - |
28 | NA | NP_757013.1 | 4930708-4930890 | 183 | + | hypothetical protein | - |
29 | NA | NP_757014.1 | 4931923-4932141 | 219 | - | partial transposase | - |
30 | NA | NP_757015.1 | 4932138-4932815 | 678 | - | transposase IS629 | - |
31 | NA | NP_757016.1 | 4932812-4933138 | 327 | - | hypothetical protein | - |
32 | NA | NP_757017.1 | 4933881-4934117 | 237 | + | hypothetical protein | - |
33 | NA | NP_757018.1 | 4934123-4934371 | 249 | - | hypothetical protein | - |
34 | NA | NP_757019.1 | 4934166-4934432 | 267 | + | hypothetical protein | - |
35 | NA | NP_757020.1 | 4934476-4935216 | 741 | + | hypothetical protein | Virulence |
36 | NA | NP_757021.1 | 4935304-4935522 | 219 | + | hypothetical protein | - |
37 | NA | NP_757022.1 | 4935990-4938038 | 2049 | + | iron-regulated outer membrane virulence protein | Virulence |
38 | NA | NP_757023.1 | 4938218-4938349 | 132 | - | hypothetical protein | - |
39 | NA | NP_757024.1 | 4938378-4939160 | 783 | - | transposase | - |
40 | NA | NP_757025.1 | 4939432-4939758 | 327 | + | hypothetical protein | - |
41 | NA | NP_757026.1 | 4939758-4940645 | 888 | + | transposase IS629 | - |
42 | papG_2 | NP_757027.1 | 4940831-4941841 | 1011 | - | PapG protein | Virulence |
43 | papF_2 | NP_757028.1 | 4941885-4942415 | 531 | - | PapF protein | Virulence |
44 | papE_2 | NP_757029.1 | 4942460-4942999 | 540 | - | PapE protein | Virulence |
45 | papK_2 | NP_757030.1 | 4943008-4943547 | 540 | - | PapK protein | Virulence |
46 | NA | NP_757031.1 | 4943153-4943767 | 615 | + | hypothetical protein | Virulence |
47 | papJ_2 | NP_757032.1 | 4943554-4944135 | 582 | - | PapJ protein | Virulence |
48 | papD_2 | NP_757033.1 | 4944172-4944906 | 735 | - | PapD protein | Virulence |
49 | papC_2 | NP_757034.1 | 4944977-4947508 | 2532 | - | PapC protein | Virulence |
50 | papH_2 | NP_757035.1 | 4947546-4948133 | 588 | - | PapH protein | Virulence |
51 | papA_2 | NP_757036.1 | 4948203-4948799 | 597 | - | PapA protein | Virulence |
52 | papI_2 | NP_757037.1 | 4949723-4949944 | 222 | + | PapI protein | Virulence |
53 | NA | NP_757038.1 | 4949967-4950092 | 126 | - | hypothetical protein | - |
54 | NA | NP_757039.1 | 4950188-4950634 | 447 | + | hypothetical protein | - |
55 | NA | NP_757040.1 | 4950287-4950520 | 234 | - | hypothetical protein | Virulence |
56 | NA | NP_757041.1 | 4950589-4951305 | 717 | - | hypothetical protein | Virulence |
57 | NA | NP_757042.1 | 4951420-4951572 | 153 | - | hypothetical protein | - |
58 | NA | NP_757043.1 | 4951662-4951988 | 327 | - | hypothetical protein | - |
59 | NA | NP_757044.1 | 4952414-4952704 | 291 | + | transposase insC | - |
60 | NA | NP_757045.1 | 4952728-4953375 | 648 | + | transposase insD | - |
61 | NA | NP_757046.1 | 4953372-4953542 | 171 | + | hypothetical protein | - |
62 | NA | NP_757047.1 | 4953577-4953954 | 378 | - | hypothetical protein | - |
63 | NA | NP_757048.1 | 4953819-4953944 | 126 | + | hypothetical protein | - |
64 | pgtP | NP_757049.1 | 4953985-4955349 | 1365 | - | transporter protein | - |
65 | pgtC | NP_757050.1 | 4955658-4956965 | 1308 | + | regulatory protein | - |
66 | pgtB | NP_757051.1 | 4956962-4958971 | 2010 | + | regulatory protein | - |
67 | pgtA | NP_757052.1 | 4958952-4960208 | 1257 | + | transport activator | - |
68 | NA | NP_757053.1 | 4961189-4961833 | 645 | - | hypothetical protein | - |
69 | NA | NP_757054.1 | 4961854-4962162 | 309 | - | hypothetical protein | - |
70 | NA | NP_757055.1 | 4962202-4962357 | 156 | - | hypothetical protein | - |
71 | NA | NP_757056.1 | 4962284-4962847 | 564 | - | hypothetical protein | Virulence |
72 | NA | NP_757057.1 | 4962832-4964064 | 1233 | - | hypothetical protein | Virulence |
73 | NA | NP_757058.1 | 4964200-4964853 | 654 | - | hypothetical protein | - |
74 | NA | NP_757059.1 | 4965038-4966498 | 1461 | - | hypothetical protein | - |
75 | NA | NP_757060.1 | 4965775-4965957 | 183 | + | hypothetical protein | - |
76 | NA | NP_757061.1 | 4966657-4967547 | 891 | - | transposase IS629 | - |
77 | NA | NP_757062.1 | 4967544-4967870 | 327 | - | hypothetical protein | - |
78 | NA | NP_757063.1 | 4967922-4969685 | 1764 | - | hypothetical protein | - |
79 | NA | NP_757064.1 | 4970125-4971387 | 1263 | - | prophage P4 integrase | - |
80 | tRNA-Phe | - | 4971585-4971660 | 76 | - | tRNA-Phe | - |