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Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Shigella flexneri 2457T (NC_004741) Location : 219312 - 241633 bp Size : 22322 bp GC content : 51.7 % GC bias (=GCregion - GCgenome) : 0.76 % |
| No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
| 1 | tRNA-Asp | - | 219312-219388 | 77 | + | tRNA-Asp | - |
| 2 | dkgB | NP_835929.1 | 219551-220354 | 804 | + | 2,5-diketo-D-gluconate reductase B | - |
| 3 | NA | NP_835930.1 | 220393-221721 | 1329 | - | IS4 orf | - |
| 4 | yafC | NP_835931.1 | 221789-222703 | 915 | - | transcriptional regulator LYSR-type | - |
| 5 | yafD | NP_835932.1 | 222944-223744 | 801 | + | hypothetical protein | - |
| 6 | yafE | NP_835933.1 | 223972-224592 | 621 | + | biotin synthesis protein | - |
| 7 | mltD | NP_835934.1 | 224640-225986 | 1347 | - | membrane-bound lytic murein transglycosylase D | - |
| 8 | gloB | NP_835935.1 | 226058-226813 | 756 | - | hydroxyacylglutathione hydrolase | - |
| 9 | yafS | NP_835936.1 | 226844-227569 | 726 | + | hypothetical protein | - |
| 10 | rnhA | NP_835937.1 | 227566-228033 | 468 | - | ribonuclease H | - |
| 11 | dnaQ | NP_835938.1 | 228098-228829 | 732 | + | DNA polymerase III subunit epsilon | - |
| 12 | tRNA-Asp | - | 228962-229038 | 77 | + | tRNA-Asp | - |
| 13 | safA | NP_835939.1 | 229169-230215 | 1047 | - | hypothetical protein | - |
| 14 | NA | NP_835940.1 | 230226-230339 | 114 | - | hypothetical protein | - |
| 15 | safB | NP_835941.1 | 230483-230788 | 306 | - | periplasmic chaperone of fimbral assembly machinery | - |
| 16 | safC | NP_835942.1 | 230785-232668 | 1884 | - | outer membrane usher protein | Virulence |
| 17 | NA | NP_835943.1 | 232684-233178 | 495 | - | hypothetical protein | - |
| 18 | sat1 | NP_835944.1 | 233373-234005 | 633 | - | hypothetical protein | - |
| 19 | sat2 | NP_835945.1 | 233992-234369 | 378 | - | hypothetical protein | - |
| 20 | NA | NP_835946.1 | 234607-234906 | 300 | - | hypothetical protein | - |
| 21 | NA | NP_835947.1 | 234959-235369 | 411 | + | insertion sequence 2 OrfA protein | - |
| 22 | NA | NP_835948.1 | 235327-236232 | 906 | + | insertion element IS2 transposase InsD | - |
| 23 | NA | NP_835949.1 | 236654-236956 | 303 | + | IS911 orfA | - |
| 24 | NA | NP_835950.1 | 236983-237822 | 840 | + | IS911 orfB | - |
| 25 | NA | NP_835952.1 | 238511-238780 | 270 | - | endolysin R of prophage CP-933V | - |
| 26 | NA | NP_835953.1 | 239101-239415 | 315 | - | hypothetical protein | - |
| 27 | NA | NP_835954.1 | 239420-239635 | 216 | - | lysis protein S | - |
| 28 | NA | NP_835955.1 | 239992-240366 | 375 | + | hypothetical protein | - |
| 29 | NA | NP_835956.1 | 240390-240797 | 408 | - | hypothetical protein | - |
| 30 | NA | NP_835957.1 | 240794-241846 | 1053 | - | IS911 orfA | - |
| 31 | NA | NP_835958.1 | 240794-241633 | 840 | - | IS911 orfB | - |