Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Shigella flexneri 2457T (NC_004741) Location : 3044640 - 3115039 bp Size : 70400 bp GC content : 49.5 % GC bias (=GCregion - GCgenome) : -1.4 % |
No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
1 | tRNA-Phe | - | 3044640-3044715 | 76 | + | tRNA-Phe | - |
2 | NA | NP_838459.1 | 3044913-3046175 | 1263 | + | P4-type integrase | - |
3 | NA | NP_838460.1 | 3046628-3050143 | 3516 | + | superfamily I DNA helicase | Virulence |
4 | NA | - | 3050283-3050498 | 216 | + | - | - |
5 | NA | NP_838461.1 | 3051492-3052253 | 762 | + | hypothetical protein | Virulence |
6 | sigA | NP_838462.1 | 3052614-3056471 | 3858 | + | serine protease | Virulence |
7 | NA | NP_838463.1 | 3059545-3059763 | 219 | + | hypothetical protein | - |
8 | pic | NP_838464.1 | 3059914-3063126 | 3213 | - | serine protease precurser | Virulence |
9 | NA | NP_838465.1 | 3064760-3065593 | 834 | - | reverse transcriptase-like protein | - |
10 | NA | NP_838466.1 | 3065587-3066267 | 681 | - | reverse transcriptase-like protein | - |
11 | NA | NP_838467.1 | 3067353-3067679 | 327 | - | IS629 orfA | - |
12 | NA | NP_838468.1 | 3067962-3068387 | 426 | - | hypothetical protein | Virulence |
13 | NA | NP_838469.1 | 3068384-3068767 | 384 | - | hypothetical protein | Virulence |
14 | NA | NP_838470.1 | 3069140-3069739 | 600 | - | hypothetical protein | Virulence |
15 | NA | NP_838471.2 | 3070456-3070821 | 366 | + | insertion sequence 2 OrfA protein | - |
16 | NA | NP_838472.2 | 3070779-3071684 | 906 | + | insertion element IS2 transposase InsD | - |
17 | NA | NP_838473.1 | 3073538-3073744 | 207 | + | hypothetical protein | Virulence |
18 | NA | NP_838474.1 | 3073830-3074402 | 573 | + | hypothetical protein | Virulence |
19 | NA | NP_838475.1 | 3074404-3074688 | 285 | - | hypothetical protein | - |
20 | NA | NP_838476.1 | 3075971-3076990 | 1020 | + | hypothetical protein | Virulence |
21 | sap | NP_838477.1 | 3077100-3077972 | 873 | + | hypothetical protein | Virulence |
22 | NA | NP_838478.1 | 3078306-3079199 | 894 | + | outer membrane fluffing protein | - |
23 | NA | NP_838479.1 | 3079305-3081425 | 2121 | + | outer membrane fluffing protein | Virulence |
24 | NA | NP_838480.1 | 3081546-3084062 | 2517 | + | hypothetical protein | Virulence |
25 | NA | NP_838481.1 | 3084138-3084593 | 456 | + | hypothetical protein | Virulence |
26 | NA | NP_838482.1 | 3085004-3085822 | 819 | + | hypothetical protein | Virulence |
27 | NA | NP_838483.1 | 3086164-3086637 | 474 | + | hypothetical protein | Virulence |
28 | yeeS | NP_838484.1 | 3086638-3087129 | 492 | + | RADC family DNA repair protein | Virulence |
29 | yeeT | NP_838485.1 | 3087216-3087437 | 222 | + | hypothetical protein | Virulence |
30 | yeeU | NP_838486.1 | 3087517-3087894 | 378 | + | structural protein | Virulence |
31 | yeeV | NP_838487.1 | 3087941-3088318 | 378 | + | hypothetical protein | Virulence |
32 | yeeW | NP_838488.1 | 3088315-3088803 | 489 | + | hypothetical protein | Virulence |
33 | NA | NP_838489.1 | 3089105-3089947 | 843 | + | hypothetical protein | Virulence |
34 | NA | NP_838490.1 | 3091372-3091671 | 300 | + | IS3 orfA | - |
35 | NA | NP_838491.1 | 3091668-3092534 | 867 | + | IS3 orfB | - |
36 | NA | NP_838492.1 | 3093171-3093410 | 240 | - | hypothetical protein | - |
37 | NA | NP_838493.1 | 3093545-3094150 | 606 | - | hypothetical protein | - |
38 | NA | NP_838494.1 | 3094265-3094768 | 504 | - | IS1 orfB | - |
39 | NA | NP_838495.1 | 3094687-3094962 | 276 | - | IS1 orfA | - |
40 | yghK | NP_838496.1 | 3096365-3097951 | 1587 | - | permease | - |
41 | glcB | NP_838497.1 | 3098306-3100477 | 2172 | - | malate synthase G | - |
42 | glcG | NP_838498.1 | 3100499-3100903 | 405 | - | hypothetical protein | - |
43 | glcF | - | 3100908-3103190 | 2283 | - | - | - |
44 | glcD | - | 3103190-3104689 | 1500 | - | - | - |
45 | glcC | NP_838499.1 | 3104940-3105710 | 771 | + | DNA-binding transcriptional regulator GlcC | - |
46 | NA | - | 3105834-3106948 | 1115 | - | - | - |
47 | NA | NP_838500.1 | 3107379-3109067 | 1689 | + | acyl-CoA synthetase | - |
48 | NA | NP_838501.1 | 3109082-3109978 | 897 | + | hypothetical protein | - |
49 | NA | NP_838502.1 | 3110011-3110259 | 249 | + | hypothetical protein | - |
50 | NA | NP_838503.1 | 3110259-3110609 | 351 | + | class II aminotransferase | - |
51 | NA | NP_838504.1 | 3110642-3111430 | 789 | + | class II aminotransferase | - |
52 | NA | NP_838505.1 | 3111466-3112545 | 1080 | - | hypothetical protein | - |
53 | NA | NP_838506.1 | 3112542-3113612 | 1071 | - | hypothetical protein | - |
54 | NA | NP_838507.1 | 3113643-3114203 | 561 | - | hypothetical protein | - |
55 | NA | NP_838508.1 | 3114215-3115039 | 825 | - | hypothetical protein | - |