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Type: PAI-like region not overlapping GI(s) Strain : Pseudomonas syringae 1448A (NC_005773) Location : 1461361 - 1522276 bp Size : 60916 bp GC content : 58.0 % GC bias (=GCregion - GCgenome) : 0.01 % |
| No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
| 1 | NA | YP_273517.1 | 1461361-1462380 | 1020 | - | transketolase, C-terminal subunit | - |
| 2 | NA | YP_273518.1 | 1462377-1463225 | 849 | - | transketolase | - |
| 3 | NA | YP_273519.1 | 1463244-1464641 | 1398 | - | MFS transporter | - |
| 4 | NA | YP_273520.1 | 1464646-1465395 | 750 | - | 3-oxoacyl-ACP reductase | - |
| 5 | NA | YP_273521.1 | 1465584-1466501 | 918 | + | transcriptional regulator | - |
| 6 | NA | YP_273522.1 | 1466610-1467014 | 405 | + | short chain dehydrogenase/reductase oxidoreductase | - |
| 7 | NA | YP_273523.1 | 1467437-1469956 | 2520 | + | two-component sensor histidine kinase | - |
| 8 | NA | - | 1470143-1471088 | 946 | - | - | - |
| 9 | hopAA1 | - | 1471478-1472897 | 1420 | + | - | Virulence |
| 10 | hrpW1 | YP_273524.1 | 1472985-1474181 | 1197 | - | type III helper protein HrpW1 | Virulence |
| 11 | shcM | YP_273525.1 | 1474485-1474979 | 495 | + | type III chaperone protein ShcM | Virulence |
| 12 | hopM1 | - | 1474976-1477211 | 2236 | + | - | Virulence |
| 13 | avrF | YP_273526.1 | 1477289-1477678 | 390 | + | type III chaperone protein AvrF | Virulence |
| 14 | avrE1 | YP_273527.1 | 1477727-1482871 | 5145 | - | type III effector AvrE1 | Virulence |
| 15 | NA | YP_273528.1 | 1483093-1484556 | 1464 | + | lytic murein transglycosylase | Virulence |
| 16 | hrpR | YP_273529.1 | 1485638-1486558 | 921 | + | type III transcriptional regulator HrpR | Virulence |
| 17 | hrpS | YP_273530.1 | 1486609-1487517 | 909 | + | type III transcriptional regulator HrpS | Virulence |
| 18 | hrpA2 | YP_273531.1 | 1487609-1487935 | 327 | + | type III helper protein HrpA2 | Virulence |
| 19 | hrpZ1 | YP_273532.1 | 1487989-1489026 | 1038 | + | type III restriction system endonuclease | Virulence |
| 20 | hrpB | YP_273533.1 | 1489054-1489428 | 375 | + | type III secretion component protein HrpB | Virulence |
| 21 | hrcJ | YP_273534.1 | 1489437-1490243 | 807 | + | type III secretion component protein HrcJ | Virulence |
| 22 | hrpD | YP_273535.1 | 1490243-1490770 | 528 | + | type III secretion component protein HrpD | Virulence |
| 23 | hrpE | YP_273536.1 | 1490806-1491387 | 582 | + | type III secretion component protein HrpE | Virulence |
| 24 | hrpF | YP_273537.1 | 1491471-1491695 | 225 | + | type III secretion component protein HrpF | Virulence |
| 25 | hrpG | YP_273538.1 | 1491673-1492113 | 441 | + | type III secretion component protein HrpG | Virulence |
| 26 | hrcC | YP_273539.1 | 1492115-1494214 | 2100 | + | type III outer membrane protein HrcC | Virulence |
| 27 | hrpT | YP_002381169.1 | 1494211-1494414 | 204 | + | HrpT protein | Virulence |
| 28 | hrpV | YP_273540.1 | 1494417-1494764 | 348 | + | type III negative regulator of hrp expression HrpV | Virulence |
| 29 | hrcU | YP_273541.1 | 1494962-1496041 | 1080 | - | type III secretion component protein HrcU | Virulence |
| 30 | hrcT | YP_273542.1 | 1496038-1496832 | 795 | - | type III secretion component protein HrcT | Virulence |
| 31 | hrcS | YP_273543.1 | 1496833-1497099 | 267 | - | type III secretion component protein HrcS | Virulence |
| 32 | hrcR | YP_273544.2 | 1497107-1497754 | 648 | - | type III secretion system protein | Virulence |
| 33 | hrcQb | YP_273545.1 | 1497757-1498143 | 387 | - | type III secretion component protein HrcQb | Virulence |
| 34 | hrcQa | YP_273546.1 | 1498133-1498849 | 717 | - | type III secretion component protein HrcQa | Virulence |
| 35 | hrpP | YP_273547.1 | 1498846-1499418 | 573 | - | type III secretion protein HrpP | Virulence |
| 36 | hrpO | YP_273548.1 | 1499425-1499871 | 447 | - | type III secretion component protein HrpO | Virulence |
| 37 | hrcN | YP_273549.1 | 1499874-1501223 | 1350 | - | type III secretion component protein HrcN | Virulence |
| 38 | hrpQ | YP_273550.1 | 1501220-1502194 | 975 | - | type III secretion component protein HrpQ | Virulence |
| 39 | hrcV | YP_273551.1 | 1502228-1504315 | 2088 | - | type III secretion component protein HrcV | Virulence |
| 40 | hrpJ | YP_273552.1 | 1504312-1505418 | 1107 | - | type III secretion component protein HrcJ | Virulence |
| 41 | hrpL | YP_273553.1 | 1505662-1506216 | 555 | + | RNA polymerase sigma factor HrpL | - |
| 42 | hrpK1 | YP_273554.1 | 1506290-1508599 | 2310 | + | type III effector HrpK1 | Virulence |
| 43 | hopX1 | YP_273555.1 | 1508695-1509837 | 1143 | + | type III effector HopX1 | - |
| 44 | NA | YP_273556.1 | 1510066-1510434 | 369 | + | serine-aspartate repeat-containing protein | - |
| 45 | tRNA-Leu | - | 1510567-1510651 | 85 | - | tRNA-Leu | - |
| 46 | queA | YP_273557.1 | 1510769-1511833 | 1065 | + | S-adenosylmethionine--tRNA ribosyltransferase-isomerase | - |
| 47 | tgt | YP_273558.1 | 1511830-1512963 | 1134 | + | queuine tRNA-ribosyltransferase | - |
| 48 | yajC | YP_273559.1 | 1513017-1513352 | 336 | + | preprotein translocase subunit YajC | - |
| 49 | secD | YP_273560.1 | 1513416-1515284 | 1869 | + | preprotein translocase subunit SecD | - |
| 50 | secF | YP_273561.1 | 1515294-1516205 | 912 | + | preprotein translocase subunit SecF | - |
| 51 | NA | YP_273562.1 | 1516314-1516853 | 540 | + | hypothetical protein | - |
| 52 | NA | YP_273563.1 | 1516920-1517735 | 816 | - | inositol monophosphatase | - |
| 53 | NA | YP_273564.1 | 1517951-1518724 | 774 | + | RNA methyltransferase | - |
| 54 | cysE1 | YP_273565.1 | 1518724-1519500 | 777 | + | serine O-acetyltransferase | - |
| 55 | iscR | YP_273566.1 | 1519659-1520150 | 492 | + | iron-sulfur cluster assembly transcription factor IscR | - |
| 56 | iscS | YP_273567.1 | 1520195-1521409 | 1215 | + | cysteine desulfurase | - |
| 57 | iscU | YP_273568.1 | 1521491-1521877 | 387 | + | scaffold protein | - |
| 58 | iscA | YP_273569.1 | 1521953-1522276 | 324 | + | iron-sulfur cluster assembly protein IscA | - |