PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Yersinia pestis 91001 (NC_005810)
Location : 4385817 - 4406406 bp
Size : 20590 bp
GC content : 45.2 %
GC bias (=GCregion - GCgenome) : -2.49 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1NA NP_995127.1 4385817-4386020 204 - hypothetical protein-
2NA NP_995128.1 4386277-4386489 213 - hypothetical protein-
3lysR22 NP_995129.1 4386536-4387234 699 + DNA-binding transcriptional regulator-
4lysR23 NP_995130.1 4387486-4388361 876 + LysR family transcriptional regulator-
5NA NP_995131.1 4388522-4388683 162 - hypothetical protein-
6tcaA1 NP_995132.1 4388774-4391104 2331 + insecticial toxin-
7tcbA NP_995133.1 4391145-4394738 3594 + toxin subunit-
8tcaC1 NP_995134.1 4394795-4399285 4491 + insecticidal toxin complexVirulence
9NA - 4396227-4396262 36 + --
10NA NP_995135.1 4399419-4399721 303 + phage-like protein-
11NA NP_995136.1 4399725-4400135 411 + phage-like protein-
12NA NP_995137.1 4400123-4400491 369 + hypothetical protein-
13NA NP_995138.1 4400478-4400651 174 + hypothetical protein-
14tccC1 NP_995139.1 4400692-4403523 2832 + toxin subunitVirulence
15tccC2 NP_995140.1 4403548-4406406 2859 + insecticidal toxinVirulence


NA