PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Salmonella enterica ATCC 9150 (NC_006511)
Location : 2545075 - 2614199 bp
Size : 69125 bp
GC content : 50.5 %
GC bias (=GCregion - GCgenome) : -1.69 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1NA YP_151640.1 2545075-2545482 408 + secreted protein-
2NA YP_151641.1 2545813-2546532 720 + outer membrane adhesin-
3NA - 2547495-2548112 618 - --
4tinR YP_151642.1 2548252-2548707 456 - transcriptional regulator-
5tcfD YP_151643.1 2548840-2549919 1080 - fimbrail protein-
6tcfC YP_151644.1 2549942-2552629 2688 - outermembrane fimbrial usher protein-
7tcfB YP_151645.1 2552738-2553313 576 - fimbrial subunitVirulence
8tcfA YP_151646.1 2553364-2554074 711 - fimbrial protein-
9NA YP_151647.1 2555289-2555666 378 + hypothetical protein-
10NA YP_151648.1 2555725-2555892 168 - hypothetical protein-
11NA YP_151649.1 2555967-2556092 126 - hypothetical protein-
12sinR YP_151650.1 2556212-2557156 945 - LysR-family transcriptional regulator SinR-
13NA YP_151651.1 2557976-2558797 822 - ybeJ-like proteinVirulence
14safD - 2559205-2559669 465 - --
15safC YP_151652.1 2559697-2562207 2511 - outer-membrane fimbrial usher proteinVirulence
16safB YP_151653.1 2562231-2562971 741 - periplasmic fimbrial chaperone proteinVirulence
17safA YP_151654.1 2563672-2564166 495 - lipoprotein-
18NA YP_151655.1 2564946-2565227 282 - hypothetical protein-
19NA YP_151656.1 2565453-2565650 198 - hypothetical protein-
20NA YP_151657.1 2565703-2566017 315 + hypothetical protein-
21NA - 2566054-2566362 309 - --
22NA YP_151658.1 2568786-2569097 312 - hypothetical protein-
23NA YP_151659.1 2569117-2571960 2844 - Rhs-family protein-
24NA YP_151660.1 2574363-2576609 2247 - hypothetical protein-
25NA YP_151661.1 2576641-2577102 462 - hypothetical protein-
26NA YP_151662.1 2577104-2577847 744 - hypothetical protein-
27NA YP_151663.1 2577932-2578393 462 - secreted protein-
28NA YP_151664.1 2578378-2578848 471 - hypothetical protein-
29NA YP_151665.1 2578952-2579425 474 - secreted protein-
30NA - 2579410-2579879 470 - --
31NA YP_151666.1 2579922-2580689 768 - hypothetical protein-
32NA YP_151667.1 2580689-2584549 3861 - inner membrane protein-
33NA YP_151668.1 2584583-2585014 432 - shiga-like toxin A subunit-
34NA YP_151669.1 2585216-2585989 774 - hypothetical protein-
35NA YP_151670.1 2585994-2587298 1305 - hypothetical protein-
36NA YP_151671.1 2587295-2588638 1344 - hypothetical protein-
37NA YP_151672.1 2588642-2589178 537 - lipoprotein-
38NA YP_151673.1 2589246-2589731 486 - hypothetical proteinVirulence
39NA YP_151674.1 2589874-2590257 384 - hypothetical protein-
40NA YP_151675.1 2590242-2590727 486 - hypothetical protein-
41NA YP_151676.1 2590838-2590954 117 - hypothetical protein-
42NA YP_151677.1 2591021-2591506 486 - hypothetical proteinVirulence
43NA YP_151678.1 2591758-2592090 333 - hypothetical protein-
44NA YP_151679.1 2592217-2592342 126 - hypothetical protein-
45NA YP_151680.1 2592670-2594178 1509 - hypothetical proteinVirulence
46NA YP_151681.1 2594202-2594744 543 - hypothetical proteinVirulence
47NA YP_151682.1 2594806-2595096 291 - hypothetical protein-
48NA YP_151683.1 2595099-2595197 99 - hypothetical protein-
49NA YP_151684.1 2595182-2597845 2664 - ClpB-like proteinVirulence
50NA YP_151685.1 2598133-2598204 72 + hypothetical protein-
51NA - 2598213-2599115 903 + --
52NA YP_151686.1 2599102-2599926 825 + hypothetical protein-
53NA YP_151687.1 2599923-2600417 495 + hypothetical protein-
54NA YP_151688.1 2600433-2602316 1884 + hypothetical proteinVirulence
55NA YP_151689.1 2602313-2603308 996 + hypothetical protein-
56NA YP_151690.1 2603319-2604362 1044 + hypothetical protein-
57tRNA-Asp - 2604686-2604759 74 - tRNA-Asp-
58dnaQ YP_151691.1 2604893-2605624 732 - DNA polymerase III subunit epsilon-
59rnhA YP_151692.1 2605688-2606155 468 + ribonuclease H-
60yafS YP_151693.1 2606152-2606874 723 - hypothetical protein-
61gloB YP_151694.1 2606909-2607664 756 + hydroxyacylglutathione hydrolase-
62mltD YP_151695.1 2607736-2609103 1368 + membrane-bound lytic murein transglycosylase d precursor-
63yafE YP_151696.1 2609159-2609929 771 - methyltransferase-
64yafD YP_151697.1 2610007-2610786 780 - hypothetical protein-
65NA YP_151698.1 2610939-2612114 1176 - drug efflux protein-
66yafC YP_151699.1 2612219-2613133 915 + hypothetical transcriptional regulator-
67yafB YP_151700.1 2613155-2613958 804 - hypothetical oxidoreductase-
68tRNA-Asp - 2614126-2614199 74 - tRNA-Asp-


tRNA-Asp tRNA-Asp PI: Sal.6.NC_003198_P1STY0352 STY0351 STY0350 tinR tcfD tsaC tcfB tcfA STY0342 sinR STY0338 safD safC safB safA STY0328 STY0324 STY0319 STY0314 STY0312 STY0311 STY0313 STY0312 STY0314 STY0311 STY0310 STY0306 STY0305 STY0304 STY0303 STY0302 STY0302 STY0297 STY0296 STY0295 STY0294 STY0293 STY0292 STY0291 STY0290 STY0289 STY0288 -PI: Pho.1-dnaQ rnhA orf71 gloB mltD -

• PAIs homologous to this region

tcd island (Photorhabdus luminescens W14)
SPI-6 (Salmonella enterica subsp. enterica serovar Typhi CT18)