Home PAIs REIs Genomes Search Links |
|
Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Salmonella enterica SC-B67 (NC_006905) Location : 1497670 - 1539498 bp Size : 41829 bp GC content : 47.5 % GC bias (=GCregion - GCgenome) : -4.7 % |
No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
1 | pykF | YP_216386.1 | 1497670-1499082 | 1413 | - | pyruvate kinase | Virulence |
2 | ycjj | YP_216387.1 | 1499484-1500827 | 1344 | - | amino acid permease | Virulence |
3 | pip | YP_216388.1 | 1500849-1501742 | 894 | - | hydrolase or acyltransferase | Virulence |
4 | NA | YP_216389.1 | 1501801-1502538 | 738 | - | hypothetical protein | Virulence |
5 | NA | - | 1502444-1502527 | 84 | + | - | - |
6 | rbsk | YP_216390.1 | 1502550-1503776 | 1227 | - | DeoR family transcriptional regulator | Virulence |
7 | ttrA | YP_216391.1 | 1504099-1507161 | 3063 | - | tetrathionate reductase complex subunit A | Virulence |
8 | ttrC | YP_216392.1 | 1507154-1508176 | 1023 | - | tetrathionate reductase complex subunit C | Virulence |
9 | ttrB | YP_216393.1 | 1508177-1508911 | 735 | - | tetrathionate reductase complex subunit B | Virulence |
10 | ttrS | YP_216394.1 | 1509093-1510871 | 1779 | + | tetrathionate reductase complex: sensory transduction histidine kinase | Virulence |
11 | ttrR | YP_216395.1 | 1510846-1511466 | 621 | + | tetrathionate reductase complex: response regulator | Virulence |
12 | NA | YP_216396.1 | 1511513-1511776 | 264 | + | hypothetical protein | Virulence |
13 | NA | YP_216397.1 | 1511872-1512831 | 960 | - | inner membrane protein | Virulence |
14 | NA | YP_216398.1 | 1513003-1513731 | 729 | - | MerR family transcriptional regulator | Virulence |
15 | ssrB | YP_216399.1 | 1513910-1514548 | 639 | - | secretion system transcriptonal activator | Virulence |
16 | ssrA | YP_216400.1 | 1514579-1517341 | 2763 | - | secretion system regulator:sensor component | Virulence |
17 | ssaB | YP_216401.1 | 1517742-1518143 | 402 | + | secretion system apparatus protein SsaB | Virulence |
18 | ssaC | YP_216402.1 | 1518145-1519638 | 1494 | + | secretion system apparatus protein SsaC | Virulence |
19 | ssaD | YP_216403.1 | 1519619-1520830 | 1212 | + | secretion system apparatus protein SsaD | Virulence |
20 | ssaE | YP_216404.1 | 1520838-1521080 | 243 | + | secretion system effector protein SsaE | Virulence |
21 | NA | - | 1521094-1521243 | 150 | + | - | - |
22 | sseA | YP_216405.1 | 1521289-1521615 | 327 | + | secretion system effector protein SseA | Virulence |
23 | sseB | YP_216406.1 | 1521622-1522212 | 591 | + | secretion system effector protein SseB | Virulence |
24 | NA | YP_216407.1 | 1522209-1522682 | 474 | + | secretion system chaperone protein SscA | Virulence |
25 | sseC | YP_216408.1 | 1522685-1524139 | 1455 | + | secretion system effector protein SseC | Virulence |
26 | sseD | YP_216409.1 | 1524155-1524742 | 588 | + | secretion system effector protein SseD | Virulence |
27 | sseE | YP_216410.1 | 1524745-1525161 | 417 | + | secretion system effector SseE | Virulence |
28 | NA | YP_216411.1 | 1525213-1525647 | 435 | + | secretion system chaperone protein SscB | Virulence |
29 | sseF | YP_216412.1 | 1525663-1526445 | 783 | + | secretion system effector protein SseF | Virulence |
30 | sseG | YP_216413.1 | 1526442-1527131 | 690 | + | secretion system effector protein SseG | Virulence |
31 | ssaG | YP_216414.1 | 1527174-1527440 | 267 | + | secretion system apparatus protein SsaG | Virulence |
32 | ssaH | YP_216415.1 | 1527418-1527708 | 291 | + | secretion system apparatus protein SsaH | Virulence |
33 | ssaI | YP_216416.1 | 1527720-1527968 | 249 | + | secretion system apparatus protein SsaI | Virulence |
34 | ssaJ | YP_216417.1 | 1527965-1528714 | 750 | + | secretion system apparatus protein SsaJ | Virulence |
35 | NA | YP_216418.1 | 1528732-1529280 | 549 | + | hypothetical protein | Virulence |
36 | ssaK | YP_216419.1 | 1529277-1529951 | 675 | + | secretion system apparatus protein SsaK | Virulence |
37 | ssaL | YP_216420.1 | 1529917-1530933 | 1017 | + | secretion system apparatus protein SsaL | Virulence |
38 | ssaM | YP_216421.1 | 1530991-1531359 | 369 | + | secretion system apparatus protein SsaM | Virulence |
39 | ssaV | YP_216422.1 | 1531344-1533389 | 2046 | + | secretion system apparatus protein SsaV | Virulence |
40 | ssaN | YP_216423.1 | 1533379-1534680 | 1302 | + | type III secretion system ATPase | Virulence |
41 | ssaO | YP_216424.1 | 1534629-1535060 | 432 | + | secretion system apparatus protein SsaO | Virulence |
42 | ssaP | YP_216425.1 | 1535041-1535415 | 375 | + | secretion system apparatus protein SsaP | Virulence |
43 | ssaQ | YP_216426.1 | 1535396-1536364 | 969 | + | type III secretion system protein | Virulence |
44 | ssaR | YP_216427.1 | 1536432-1537079 | 648 | + | type III secretion system protein | Virulence |
45 | ssaS | YP_216428.1 | 1537076-1537342 | 267 | + | secretion system apparatus protein SsaS | Virulence |
46 | ssaT | YP_216429.1 | 1537343-1538122 | 780 | + | secretion system apparatus protein SsaT | Virulence |
47 | ssaU | YP_216430.1 | 1538119-1539177 | 1059 | + | secretion system apparatus protein SsaU | Virulence |
48 | tRNA-Val | - | 1539335-1539411 | 77 | - | tRNA-Val | - |
49 | tRNA-Val | - | 1539422-1539498 | 77 | - | tRNA-Val | - |