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Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Shigella sonnei Ss046 (NC_007384) Location : 245365 - 280951 bp Size : 35587 bp GC content : 51.7 % GC bias (=GCregion - GCgenome) : 0.72 % |
| No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
| 1 | tRNA-Asp | - | 245365-245441 | 77 | + | tRNA-Asp | - |
| 2 | dkgB | YP_309241.1 | 245604-246407 | 804 | + | 2,5-diketo-D-gluconate reductase B | - |
| 3 | yafC | YP_309242.1 | 246404-247318 | 915 | - | LysR family transcriptional regulator | - |
| 4 | yafD | YP_309243.1 | 247559-248359 | 801 | + | hypothetical protein | - |
| 5 | yafE | YP_309244.1 | 248363-248986 | 624 | + | biotin synthesis protein | - |
| 6 | mltD | YP_309245.1 | 249035-250393 | 1359 | - | membrane-bound lytic murein transglycosylase D | - |
| 7 | gloB | YP_309246.1 | 250465-251220 | 756 | - | hydroxyacylglutathione hydrolase | - |
| 8 | yafS | YP_309247.1 | 251236-251976 | 741 | + | hypothetical protein | - |
| 9 | rnhA | YP_309248.1 | 251973-252440 | 468 | - | ribonuclease H | - |
| 10 | dnaQ | YP_309249.1 | 252505-253236 | 732 | + | DNA polymerase III subunit epsilon | - |
| 11 | tRNA-Asp | - | 253369-253445 | 77 | + | tRNA-Asp | - |
| 12 | yafT | YP_309250.1 | 253775-254560 | 786 | + | aminopeptidase | - |
| 13 | yafU | YP_309251.1 | 255186-255524 | 339 | - | hypothetical protein | - |
| 14 | NA | YP_309252.1 | 256165-256647 | 483 | - | Hcp-like protein | - |
| 15 | NA | YP_309253.1 | 256671-258023 | 1353 | - | hypothetical protein | - |
| 16 | NA | YP_309254.1 | 258034-258720 | 687 | - | hypothetical protein | - |
| 17 | NA | YP_309255.1 | 258757-259932 | 1176 | - | hypothetical protein | - |
| 18 | NA | YP_309256.2 | 259945-260850 | 906 | - | insertion element IS2 transposase InsD | - |
| 19 | NA | YP_309257.1 | 260808-261173 | 366 | - | insertion sequence 2 OrfA protein | - |
| 20 | NA | YP_309258.1 | 261215-262894 | 1680 | - | hypothetical protein | - |
| 21 | NA | YP_309259.1 | 262913-264325 | 1413 | - | hypothetical protein | - |
| 22 | NA | YP_309260.1 | 264330-265022 | 693 | - | hypothetical protein | - |
| 23 | NA | YP_309261.1 | 265070-267529 | 2460 | - | ATP-dependent Clp proteinase ATP-binding protein | Virulence |
| 24 | NA | YP_309262.1 | 267548-267847 | 300 | - | hypothetical protein | - |
| 25 | NA | YP_309263.1 | 267856-268617 | 762 | - | hypothetical protein | - |
| 26 | NA | YP_309264.1 | 268622-269410 | 789 | - | hypothetical protein | - |
| 27 | NA | YP_309265.1 | 269403-269912 | 510 | - | hypothetical protein | - |
| 28 | NA | YP_309266.1 | 269954-270478 | 525 | - | lipoprotein | - |
| 29 | NA | YP_309267.1 | 270475-271755 | 1281 | - | hypothetical protein | - |
| 30 | NA | YP_309268.1 | 271780-272862 | 1083 | - | hypothetical protein | Virulence |
| 31 | NA | YP_309269.1 | 272826-274676 | 1851 | - | hypothetical protein | Virulence |
| 32 | NA | YP_309270.1 | 275100-275648 | 549 | - | hypothetical protein | - |
| 33 | NA | YP_309271.1 | 275685-276575 | 891 | - | hypothetical protein | - |
| 34 | NA | YP_309272.1 | 276626-276850 | 225 | - | hypothetical protein | - |
| 35 | NA | YP_309273.1 | 276885-277385 | 501 | - | hypothetical protein | Virulence |
| 36 | NA | YP_309274.1 | 278082-278600 | 519 | + | hemolysin co-regulated protein | - |
| 37 | vgrG | YP_309275.1 | 278810-280951 | 2142 | + | Rhs element protein | - |
