Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Shigella dysenteriae Sd197 (NC_007606) Location : 944740 - 973495 bp Size : 28756 bp GC content : 51.4 % GC bias (=GCregion - GCgenome) : 0.18 % |
No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
1 | insA | YP_402651.1 | 944740-945015 | 276 | + | IS1 ORF1 | - |
2 | insB | YP_402652.1 | 945060-945437 | 378 | + | IS1 ORF2 | - |
3 | NA | YP_402653.1 | 945448-945732 | 285 | - | iso-IS1 ORF2 | - |
4 | NA | - | 945455-946088 | 634 | - | - | - |
5 | csgD | - | 946090-946485 | 396 | + | - | - |
6 | csgE | YP_402654.1 | 946490-946879 | 390 | + | curli assembly protein CsgE | Virulence |
7 | csgF | YP_402655.1 | 946904-947320 | 417 | + | curli assembly protein CsgF | Virulence |
8 | csgG | YP_402656.1 | 947347-948180 | 834 | + | curli production assembly/transport component | Virulence |
9 | NA | YP_402657.1 | 948571-948966 | 396 | + | iso-IS1 ORF2 | - |
10 | ycdZ | YP_402658.1 | 949018-949557 | 540 | - | hypothetical protein | - |
11 | ycdY | YP_402659.1 | 949611-950165 | 555 | - | oxidoreductase | - |
12 | ycdX | YP_402660.1 | 950189-950926 | 738 | - | hydrolase | - |
13 | ycdW | YP_402661.1 | 950981-951958 | 978 | - | dehydrogenase | - |
14 | tRNA-Ser | - | 952153-952240 | 88 | + | tRNA-Ser | - |
15 | NA | YP_402662.1 | 952390-953232 | 843 | - | hypothetical protein | Virulence |
16 | NA | YP_402663.1 | 953329-953526 | 198 | - | hypothetical protein | Virulence |
17 | NA | YP_402664.1 | 953538-954029 | 492 | - | hypothetical protein | Virulence |
18 | yeeV | YP_402665.1 | 954026-954400 | 375 | - | hypothetical protein | Virulence |
19 | yeeU | YP_402666.1 | 954447-954824 | 378 | - | structural protein | Virulence |
20 | NA | YP_402667.1 | 954874-955518 | 645 | - | hypothetical protein | - |
21 | yeeT | YP_402668.1 | 955537-955758 | 222 | - | hypothetical protein | Virulence |
22 | NA | YP_402669.1 | 955827-956279 | 453 | - | radC-like protein yeeS | Virulence |
23 | NA | YP_402670.1 | 956295-956840 | 546 | - | hypothetical protein | Virulence |
24 | NA | YP_402671.1 | 957048-957869 | 822 | - | hypothetical protein | Virulence |
25 | NA | YP_402672.1 | 958263-958526 | 264 | - | hypothetical protein | - |
26 | NA | YP_402673.1 | 959177-959644 | 468 | - | hypothetical protein | - |
27 | NA | - | 960074-961246 | 1173 | + | - | - |
28 | NA | YP_402674.1 | 960581-961423 | 843 | + | IS600 ORF2 | - |
29 | NA | YP_402675.2 | 961257-962162 | 906 | - | insertion element IS2 transposase InsD | - |
30 | NA | YP_402676.1 | 962120-962485 | 366 | - | insertion sequence 2 OrfA protein | - |
31 | NA | - | 962572-962673 | 102 | + | - | - |
32 | NA | YP_402677.1 | 963197-963592 | 396 | - | iso-IS1 ORF2 | - |
33 | iroN | YP_402678.1 | 963985-966162 | 2178 | + | outer membrane receptor FepA | Virulence |
34 | iroE | YP_402679.1 | 966207-967163 | 957 | - | hypothetical protein | Virulence |
35 | iroD | YP_402680.1 | 967248-968477 | 1230 | - | ferric enterochelin esterase | Virulence |
36 | iroC | YP_402681.1 | 968581-972240 | 3660 | - | ABC transporter protein | Virulence |
37 | iroB | YP_402682.1 | 972380-973495 | 1116 | - | glycosyl transferase | Virulence |