Home PAIs REIs Genomes Search Links |
|
Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Shigella boydii Sb227 (NC_007613) Location : 1250157 - 1266041 bp Size : 15885 bp GC content : 50.8 % GC bias (=GCregion - GCgenome) : -0.39 % |
No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
1 | NA | YP_407710.1 | 1250157-1250975 | 819 | - | IS600 ORF2 | - |
2 | NA | YP_407711.1 | 1251011-1251313 | 303 | - | IS600 ORF1 | - |
3 | ipaH_4 | YP_407712.1 | 1251634-1253349 | 1716 | + | invasion plasmid antigen | Virulence |
4 | NA | YP_407713.1 | 1253707-1253994 | 288 | + | IS600 ORF1 | - |
5 | NA | YP_407714.1 | 1254044-1254862 | 819 | + | IS600 ORF2 | - |
6 | NA | - | 1255305-1255726 | 422 | + | - | - |
7 | NA | YP_407715.1 | 1255391-1255729 | 339 | + | ISSfl4 ORF1 | - |
8 | NA | YP_407716.1 | 1255769-1256659 | 891 | - | IS629 ORF2 | - |
9 | NA | YP_407717.1 | 1256656-1256982 | 327 | - | IS629 ORF1 | - |
10 | NA | YP_407718.1 | 1257063-1257413 | 351 | + | protein encoded within IS | - |
11 | NA | YP_407719.1 | 1257633-1257971 | 339 | + | protein encoded within IS | - |
12 | NA | YP_407720.1 | 1258041-1258457 | 417 | + | protein encoded within IS | - |
13 | NA | YP_407721.1 | 1258470-1259036 | 567 | + | protein encoded within IS | - |
14 | insB | YP_407722.1 | 1259056-1259532 | 477 | + | IS1 ORF2 | - |
15 | NA | - | 1259067-1259547 | 481 | + | - | - |
16 | NA | YP_407723.1 | 1259631-1260449 | 819 | - | IS600 ORF2 | - |
17 | NA | YP_407724.1 | 1260499-1260786 | 288 | - | IS600 ORF1 | - |
18 | NA | YP_407725.1 | 1260843-1261607 | 765 | - | hypothetical protein | - |
19 | sdaA | YP_407726.1 | 1261738-1263102 | 1365 | - | L-serine deaminase | - |
20 | yeaB | YP_407727.1 | 1263286-1263864 | 579 | - | hypothetical protein | - |
21 | pabB | YP_407728.1 | 1263868-1265229 | 1362 | - | p-aminobenzoate synthetase, component I | - |
22 | NA | YP_407729.1 | 1265303-1265482 | 180 | + | hypothetical protein | - |
23 | insB | YP_407730.1 | 1265538-1266041 | 504 | - | IS1 ORF2 | - |