PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Escherichia coli UTI89 (NC_007946)
Location : 233676 - 271647 bp
Size : 37972 bp
GC content : 50.6 %
GC bias (=GCregion - GCgenome) : -0.03 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1tRNA-Asp - 233676-233749 74 + tRNA-Asp-
2dkgB YP_539261.1 233915-234718 804 + 2,5-diketo-D-gluconate reductase B-
3NA YP_539262.1 234715-235629 915 - LysR family transcriptional regulator-
4yafD YP_539263.1 235846-236670 825 + hypothetical protein-
5yafE YP_539264.1 236748-237518 771 + hypothetical protein-
6mltD YP_539265.1 237565-238923 1359 - membrane-bound lytic murein transglycosylase D-
7gloB YP_539266.1 238995-239750 756 - hydroxyacylglutathione hydrolase-
8yafS YP_539267.1 239766-240506 741 + hypothetical protein-
9rnhA YP_539268.1 240503-241081 579 - ribonuclease H-
10dnaQ YP_539269.1 241026-241766 741 + DNA polymerase III subunit epsilon-
11tRNA-Asp - 241899-241972 74 + tRNA-Asp-
12yafT YP_539270.1 242304-243089 786 + aminopeptidase-
13NA YP_539271.1 243429-243908 480 - hypothetical protein-
14NA YP_539272.1 243926-245368 1443 - hypothetical protein-
15NA YP_539273.1 245295-248762 3468 - hypothetical protein-
16NA YP_539274.1 248842-250284 1443 - hypothetical protein-
17NA YP_539275.1 250289-251032 744 - hypothetical protein-
18NA YP_539276.1 251029-253788 2760 - hypothetical proteinVirulence
19NA YP_539277.1 253798-254562 765 - hypothetical protein-
20NA YP_539278.1 254567-255913 1347 - hypothetical proteinVirulence
21NA YP_539279.1 255916-256440 525 - hypothetical protein-
22NA YP_539280.1 256437-257729 1293 - hypothetical protein-
23NA YP_539281.1 257734-258783 1050 - hypothetical protein-
24NA YP_539282.1 258747-260588 1842 - hypothetical proteinVirulence
25NA YP_539283.1 260594-261019 426 - hypothetical protein-
26NA YP_539284.1 261024-262508 1485 - hypothetical proteinVirulence
27NA YP_539285.1 262531-263034 504 - hypothetical proteinVirulence
28NA YP_539286.1 263740-264258 519 + hypothetical protein-
29NA YP_539287.1 264479-266461 1983 + hypothetical protein-
30NA YP_539288.1 266568-267614 1047 + hypothetical protein-
31NA YP_539289.1 267607-269046 1440 + hypothetical protein-
32NA YP_539290.1 269021-269311 291 + hypothetical protein-
33NA YP_539291.1 270562-271065 504 + hypothetical protein-
34NA YP_539292.1 271135-271647 513 + hypothetical protein-


tRNA-Asp tRNA-Asp