PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Escherichia coli UTI89 (NC_007946)
Location : 4800650 - 4896415 bp
Size : 95766 bp
GC content : 46.8 %
GC bias (=GCregion - GCgenome) : -3.83 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1NA YP_543835.1 4800650-4800856 207 - hypothetical proteinVirulence
2NA YP_543836.1 4801149-4801307 159 - hypothetical protein-
3NA YP_543837.1 4801308-4801676 369 - hypothetical proteinVirulence
4NA YP_543838.1 4801952-4803031 1080 - F17-like fimbril adhesin subunitVirulence
5NA YP_543839.1 4803028-4805613 2586 - F17-like fimbrial usherVirulence
6NA YP_543840.1 4805570-4806295 726 - F17-like fimbrial chaperoneVirulence
7NA YP_543841.1 4806360-4806908 549 - F17-like fimbrial subunitVirulence
8NA YP_543842.1 4807484-4807882 399 - hypothetical proteinVirulence
9NA YP_543843.1 4807909-4809126 1218 - FMN-dependent dehydrogenaseVirulence
10NA YP_543844.1 4809177-4809560 384 - hypothetical protein-
11NA YP_543845.1 4809697-4810536 840 + UidR transriptional regulatorVirulence
12NA YP_543846.1 4810505-4810828 324 + hypothetical protein-
13NA YP_543847.1 4811392-4811577 186 - hypothetical proteinVirulence
14NA YP_543848.1 4811641-4812774 1134 + hypothetical protein-
15NA YP_543849.1 4812884-4814452 1569 - hypothetical protein-
16NA YP_543850.1 4814483-4814833 351 - hypothetical protein-
17NA YP_543851.1 4814830-4815192 363 - hypothetical protein-
18NA YP_543852.1 4816164-4816463 300 - hypothetical protein-
19NA YP_543853.1 4816557-4817009 453 + transposase-
20NA YP_543854.1 4817050-4817316 267 - hypothetical protein-
21cnf1 YP_543855.1 4817383-4820427 3045 - cytotoxic necrotizing factor 1Virulence
22NA YP_543856.1 4820705-4820983 279 - hypothetical protein-
23NA YP_543857.1 4821053-4821334 282 + hypothetical protein-
24hlyD YP_543858.1 4821373-4822809 1437 - hemolysin DVirulence
25hlyB YP_543859.1 4822828-4824951 2124 - hemolysin secretion protein HlyBVirulence
26hlyA YP_543860.1 4825022-4828096 3075 - hemolysin AVirulence
27hlyC YP_543861.1 4828108-4828752 645 - hemolysin CVirulence
28NA YP_543862.1 4829804-4830046 243 - hypothetical proteinVirulence
29NA YP_543863.1 4830074-4830937 864 - hypothetical proteinVirulence
30NA YP_543864.1 4830844-4831443 600 - hypothetical proteinVirulence
31NA YP_543865.1 4831580-4832302 723 + response regulatorVirulence
32NA YP_543866.1 4832303-4833775 1473 + hypothetical proteinVirulence
33NA YP_543867.1 4833855-4834208 354 - hypothetical protein-
34NA YP_543868.1 4834704-4835024 321 - hypothetical protein-
35NA YP_543869.1 4835399-4835668 270 - hypothetical protein-
36NA YP_543870.1 4836000-4837667 1668 - hypothetical proteinVirulence
37NA YP_543871.1 4837681-4840641 2961 - hypothetical proteinVirulence
38NA YP_543872.1 4840646-4841692 1047 - hypothetical protein-
39NA YP_543873.1 4841778-4842023 246 - hypothetical proteinVirulence
40NA YP_543874.1 4842073-4842429 357 - hypothetical protein-
41NA YP_543875.1 4842439-4842870 432 - hypothetical protein-
42NA YP_543876.1 4842950-4843285 336 - hypothetical proteinVirulence
43NA YP_543877.1 4843275-4843538 264 - hypothetical protein-
44NA YP_543878.1 4843587-4843910 324 - hypothetical protein-
45NA YP_543879.1 4843995-4844381 387 - hypothetical protein-
46NA YP_543880.1 4844378-4854166 9789 - ShlA/HecA/FhaA exofamily proteinVirulence
47NA YP_543881.1 4854179-4855945 1767 - hypothetical proteinVirulence
48NA YP_543882.1 4856309-4856542 234 - hypothetical proteinVirulence
49NA YP_543883.1 4856640-4857299 660 - hypothetical proteinVirulence
50NA YP_543884.1 4857531-4858079 549 - hypothetical proteinVirulence
51NA YP_543886.1 4858346-4858579 234 - hypothetical proteinVirulence
52NA YP_543887.1 4858648-4859340 693 - hypothetical proteinVirulence
53NA YP_543888.1 4859455-4860021 567 - hypothetical proteinVirulence
54NA YP_543889.1 4861132-4862460 1329 - D-serine dehydrataseVirulence
55NA YP_543890.1 4862478-4863815 1338 - permease DsdXVirulence
56NA YP_543891.1 4864027-4864977 951 + DNA-binding transcriptional regulator DsdCVirulence
57NA YP_543892.1 4865649-4865978 330 - hypothetical proteinVirulence
58NA YP_543893.1 4865994-4866395 402 - hypothetical proteinVirulence
59NA YP_543894.1 4866428-4867093 666 - hypothetical proteinVirulence
60NA YP_543895.1 4867105-4867725 621 - hypothetical proteinVirulence
61NA YP_543896.1 4867722-4868186 465 - hypothetical proteinVirulence
62NA YP_543897.1 4868198-4869145 948 - hypothetical proteinVirulence
63NA YP_543898.1 4869197-4872619 3423 - hypothetical proteinVirulence
64NA YP_543899.1 4872610-4873764 1155 - hypothetical proteinVirulence
65NA YP_543900.1 4873780-4874037 258 - hypothetical proteinVirulence
66NA YP_543901.1 4874064-4875650 1587 - hypothetical proteinVirulence
67NA YP_543902.1 4875704-4875982 279 - hypothetical proteinVirulence
68NA YP_543903.1 4875997-4876281 285 - hypothetical proteinVirulence
69NA YP_543904.1 4876299-4876577 279 - hypothetical proteinVirulence
70NA YP_543905.1 4876758-4877018 261 + hypothetical protein-
71NA YP_543906.1 4877097-4877615 519 - hypothetical proteinVirulence
72NA YP_543907.1 4877615-4878433 819 - hypothetical proteinVirulence
73NA YP_543908.1 4878456-4879034 579 - hypothetical proteinVirulence
74NA YP_543909.1 4879325-4880215 891 - hypothetical protein-
75NA YP_543910.1 4880212-4880538 327 - hypothetical protein-
76NA YP_543911.1 4881012-4882190 1179 + hypothetical proteinVirulence
77NA YP_543912.1 4882183-4883634 1452 + Na+/H+ antiporter-
78NA YP_543913.1 4884434-4884913 480 + hypothetical proteinVirulence
79NA YP_543914.1 4884948-4885826 879 - hypothetical proteinVirulence
80NA YP_543915.1 4886154-4886885 732 - hypothetical proteinVirulence
81NA YP_543916.1 4886296-4886442 147 + hypothetical protein-
82NA YP_543917.1 4888368-4889591 1224 - hypothetical proteinVirulence
83NA YP_543918.1 4889692-4890576 885 + hypothetical proteinVirulence
84NA YP_543919.1 4890595-4890750 156 + hypothetical protein-
85NA YP_543920.1 4890779-4891459 681 + hypothetical proteinVirulence
86NA YP_543921.1 4891343-4891474 132 - hypothetical protein-
87NA YP_543922.1 4891502-4892284 783 + hypothetical proteinVirulence
88ykfF YP_543923.1 4892290-4892523 234 + hypothetical proteinVirulence
89NA YP_543924.1 4892613-4893431 819 + hypothetical proteinVirulence
90NA YP_543925.1 4893522-4894007 486 + hypothetical proteinVirulence
91NA YP_543926.1 4893576-4893971 396 - hypothetical protein-
92NA YP_543927.1 4893956-4894444 489 - hypothetical protein-
93yeeS2 YP_543928.1 4894022-4894498 477 + hypothetical proteinVirulence
94yeeT2 YP_543929.1 4894585-4894806 222 + hypothetical proteinVirulence
95yeeU2 YP_543930.1 4894886-4895254 369 + hypothetical proteinVirulence
96yeeV2 YP_543931.1 4895344-4895721 378 + hypothetical proteinVirulence
97NA YP_543932.1 4895718-4896206 489 + hypothetical proteinVirulence
98NA YP_543933.1 4896218-4896415 198 + hypothetical proteinVirulence