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Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Escherichia coli 536 (NC_008253) Location : 3128084 - 3232979 bp Size : 104896 bp GC content : 47.7 % GC bias (=GCregion - GCgenome) : -2.84 % |
| No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
| 1 | tRNA-Phe | - | 3128084-3128159 | 76 | + | tRNA-Phe | - |
| 2 | NA | YP_670846.1 | 3128357-3129622 | 1266 | + | P4-type integrase | - |
| 3 | NA | YP_670847.1 | 3129973-3130362 | 390 | + | hypothetical protein | - |
| 4 | NA | YP_670848.1 | 3130778-3130969 | 192 | + | transposase-like protein | - |
| 5 | NA | YP_670849.1 | 3131239-3132021 | 783 | - | hypothetical protein | - |
| 6 | NA | YP_670850.1 | 3132074-3133066 | 993 | - | PixG protein | - |
| 7 | NA | YP_670851.1 | 3133089-3133607 | 519 | - | PixF protein | - |
| 8 | NA | YP_670852.1 | 3133691-3134254 | 564 | - | PixJ protein | - |
| 9 | NA | YP_670853.1 | 3134291-3135163 | 873 | - | PixD protein | Virulence |
| 10 | NA | YP_670854.1 | 3135091-3137661 | 2571 | - | fimbrial usher protein PixC | Virulence |
| 11 | NA | YP_670855.1 | 3137722-3138309 | 588 | - | PixH protein | Virulence |
| 12 | NA | YP_670856.1 | 3138395-3138928 | 534 | - | PixA protein | Virulence |
| 13 | NA | YP_670857.1 | 3139664-3139888 | 225 | - | hypothetical protein | - |
| 14 | NA | YP_670858.1 | 3140041-3140535 | 495 | - | hypothetical protein | - |
| 15 | NA | YP_670859.1 | 3140894-3142150 | 1257 | - | transport activator | - |
| 16 | NA | YP_670860.1 | 3142131-3144140 | 2010 | - | regulatory protein | - |
| 17 | NA | YP_670861.1 | 3144137-3145408 | 1272 | - | regulatory protein | - |
| 18 | NA | YP_670862.1 | 3145753-3147117 | 1365 | + | transporter protein | - |
| 19 | NA | YP_670863.1 | 3147160-3147525 | 366 | + | hypothetical protein | - |
| 20 | NA | YP_670864.1 | 3147553-3147759 | 207 | + | hypothetical protein | - |
| 21 | NA | YP_670865.1 | 3148065-3149078 | 1014 | - | hypothetical protein | - |
| 22 | NA | YP_670866.1 | 3149090-3150406 | 1317 | - | L-fucose permease | - |
| 23 | NA | YP_670867.1 | 3150434-3151354 | 921 | - | ribokinase sugar kinase | - |
| 24 | NA | YP_670868.1 | 3151659-3152441 | 783 | + | DeoR family transcriptional regulator | - |
| 25 | NA | YP_670869.1 | 3152542-3152658 | 117 | - | hypothetical protein | - |
| 26 | NA | YP_670870.1 | 3152669-3152869 | 201 | - | hypothetical protein | - |
| 27 | NA | YP_670871.1 | 3153510-3153731 | 222 | - | hypothetical protein | - |
| 28 | NA | YP_670872.1 | 3153836-3154369 | 534 | - | hypothetical protein | - |
| 29 | NA | YP_670873.1 | 3154363-3155202 | 840 | - | transposase (orfB) | - |
| 30 | NA | YP_670874.1 | 3155229-3155531 | 303 | - | transposase | - |
| 31 | NA | YP_670875.1 | 3155676-3155873 | 198 | - | hypothetical protein | - |
| 32 | NA | YP_670876.1 | 3156120-3156545 | 426 | - | hypothetical protein | Virulence |
| 33 | NA | YP_670877.1 | 3156542-3156925 | 384 | - | hypothetical protein | Virulence |
| 34 | NA | YP_670878.1 | 3156995-3157216 | 222 | + | hypothetical protein | - |
| 35 | NA | YP_670879.1 | 3157431-3158453 | 1023 | + | transposase for insertion sequence IS100 | - |
| 36 | NA | YP_670880.1 | 3158453-3159232 | 780 | + | transposase/IS protein | - |
| 37 | NA | YP_670881.1 | 3159276-3159854 | 579 | - | hypothetical protein | Virulence |
| 38 | NA | YP_670882.1 | 3160086-3160472 | 387 | - | hemolysin expression modulating protein | - |
| 39 | NA | YP_670883.1 | 3161311-3162102 | 792 | + | hypothetical protein | Virulence |
| 40 | NA | YP_670884.1 | 3162486-3162692 | 207 | + | regulatory protein | Virulence |
| 41 | NA | YP_670885.1 | 3162786-3163388 | 603 | + | hypothetical protein | Virulence |
| 42 | NA | YP_670886.1 | 3163449-3163763 | 315 | - | hypothetical protein | - |
| 43 | NA | YP_670887.1 | 3164148-3164360 | 213 | + | hypothetical protein | - |
| 44 | NA | YP_670888.1 | 3164407-3164709 | 303 | + | hypothetical protein | - |
| 45 | NA | YP_670889.1 | 3165098-3165310 | 213 | + | hypothetical protein | - |
| 46 | NA | YP_670890.1 | 3165831-3166457 | 627 | + | hypothetical protein | - |
| 47 | NA | YP_670891.1 | 3166597-3167271 | 675 | - | hypothetical protein | - |
| 48 | NA | YP_670892.1 | 3167566-3168438 | 873 | + | hypothetical protein | Virulence |
| 49 | NA | YP_670893.1 | 3168808-3171654 | 2847 | + | autotransporter | Virulence |
| 50 | NA | YP_670894.1 | 3171725-3171958 | 234 | + | hypothetical protein | Virulence |
| 51 | NA | YP_670895.1 | 3172049-3172867 | 819 | + | hypothetical protein | Virulence |
| 52 | NA | YP_670896.1 | 3172959-3173444 | 486 | + | hypothetical protein | Virulence |
| 53 | NA | YP_670897.1 | 3173460-3173936 | 477 | + | radC-like protein YeeS | Virulence |
| 54 | NA | YP_670898.1 | 3174005-3174226 | 222 | + | hypothetical protein | Virulence |
| 55 | NA | YP_670899.1 | 3174240-3174668 | 429 | + | hypothetical protein | Virulence |
| 56 | NA | YP_670900.1 | 3174758-3175135 | 378 | + | hypothetical protein | Virulence |
| 57 | NA | YP_670901.1 | 3175132-3175620 | 489 | + | hypothetical protein | Virulence |
| 58 | NA | YP_670902.1 | 3175587-3175829 | 243 | + | hypothetical protein | Virulence |
| 59 | NA | YP_670903.1 | 3175914-3176756 | 843 | + | hypothetical protein | Virulence |
| 60 | NA | YP_670904.1 | 3178080-3179063 | 984 | + | polysialic acid capsule expression protein KpsF | Virulence |
| 61 | NA | YP_670905.1 | 3179135-3180283 | 1149 | + | capsule polysaccharide export inner-membrane protein KpsE | Virulence |
| 62 | NA | YP_670906.1 | 3180307-3181983 | 1677 | + | polysialic acid transport protein KpsD precursor | Virulence |
| 63 | NA | YP_670907.1 | 3181993-3182733 | 741 | + | 3-deoxy-manno-octulosonate cytidylyltransferase | Virulence |
| 64 | NA | YP_670908.1 | 3182730-3184178 | 1449 | + | capsule polysaccharide export protein KpsC | Virulence |
| 65 | NA | YP_670909.1 | 3184216-3184593 | 378 | + | hypothetical protein | - |
| 66 | NA | YP_670910.1 | 3184702-3185253 | 552 | + | hypothetical protein | - |
| 67 | NA | YP_670911.1 | 3185408-3186658 | 1251 | - | capsule polysaccharide export protein KpsS | - |
| 68 | NA | YP_670912.1 | 3186695-3188824 | 2130 | - | capsule export protein KpsC | Virulence |
| 69 | NA | YP_670913.1 | 3189178-3190116 | 939 | - | hypothetical protein | Virulence |
| 70 | NA | YP_670914.1 | 3190094-3190381 | 288 | - | hypothetical protein | - |
| 71 | NA | YP_670915.1 | 3190414-3191052 | 639 | - | hypothetical protein | Virulence |
| 72 | NA | YP_670916.1 | 3191049-3192008 | 960 | - | hypothetical protein | Virulence |
| 73 | NA | YP_670917.1 | 3192005-3192994 | 990 | - | hypothetical protein | Virulence |
| 74 | NA | YP_670918.1 | 3192991-3193881 | 891 | - | glycosyltransferase | Virulence |
| 75 | NA | YP_670919.1 | 3194876-3195544 | 669 | - | polysialic acid transport ATP-binding protein KpsT | Virulence |
| 76 | NA | YP_670920.1 | 3195541-3196317 | 777 | - | polysialic acid transport protein KpsM | Virulence |
| 77 | NA | YP_670921.1 | 3197373-3197909 | 537 | - | general secretion pathway protein YghD | Virulence |
| 78 | NA | YP_670922.2 | 3197911-3198771 | 861 | - | GspL-like protein | Virulence |
| 79 | NA | YP_670923.1 | 3199086-3200063 | 978 | - | type II secretion protein GspK | Virulence |
| 80 | NA | YP_670924.1 | 3200060-3200665 | 606 | - | type II secretion protein GspJ | Virulence |
| 81 | NA | YP_670925.1 | 3200662-3201033 | 372 | - | type II secretion protein GspI | Virulence |
| 82 | NA | YP_670926.1 | 3201030-3201593 | 564 | - | type II secretion protein GspH | Virulence |
| 83 | NA | YP_670927.1 | 3201597-3202052 | 456 | - | type II secretion protein | Virulence |
| 84 | NA | YP_670928.1 | 3202069-3203292 | 1224 | - | type II secretion protein GspF | Virulence |
| 85 | NA | YP_670929.1 | 3203292-3204785 | 1494 | - | type II secretion protein GspE | Virulence |
| 86 | NA | YP_670930.1 | 3204785-3206845 | 2061 | - | type II secretion protein GspD | Virulence |
| 87 | NA | YP_670931.1 | 3206875-3207834 | 960 | - | type II secretion protein GspC | Virulence |
| 88 | NA | YP_670932.1 | 3207852-3208262 | 411 | - | lipoprotein | - |
| 89 | NA | YP_670933.1 | 3208328-3209137 | 810 | - | prepilin peptidase | - |
| 90 | NA | YP_670934.1 | 3209277-3213842 | 4566 | - | lipoprotein AcfD | Virulence |
| 91 | NA | YP_670935.1 | 3213993-3214193 | 201 | + | hypothetical protein | - |
| 92 | NA | YP_670936.1 | 3214327-3216009 | 1683 | - | glycolate transporter | - |
| 93 | NA | YP_670937.1 | 3216364-3218535 | 2172 | - | malate synthase G | - |
| 94 | NA | YP_670938.1 | 3218557-3218961 | 405 | - | hypothetical protein | - |
| 95 | glcF | YP_670939.1 | 3218966-3220189 | 1224 | - | glycolate oxidase iron-sulfur subunit | - |
| 96 | glcE | YP_670940.1 | 3220200-3221252 | 1053 | - | glycolate oxidase FAD binding subunit | - |
| 97 | NA | YP_670941.1 | 3221252-3222751 | 1500 | - | glycolate oxidase subunit GlcD | - |
| 98 | NA | YP_670942.1 | 3223002-3223766 | 765 | + | DNA-binding transcriptional regulator GlcC | - |
| 99 | NA | YP_670943.1 | 3223773-3224915 | 1143 | - | hypothetical protein | - |
| 100 | NA | YP_670944.1 | 3225287-3227008 | 1722 | + | acyl-CoA synthetase | - |
| 101 | NA | YP_670945.1 | 3227005-3227919 | 915 | + | hypothetical protein | - |
| 102 | NA | YP_670946.1 | 3227972-3228199 | 228 | + | acyl carrier protein | - |
| 103 | NA | YP_670947.1 | 3228199-3229371 | 1173 | + | aminotransferase | - |
| 104 | NA | YP_670948.1 | 3229406-3230485 | 1080 | - | permease | - |
| 105 | NA | YP_670949.1 | 3230482-3231552 | 1071 | - | permease | - |
| 106 | NA | YP_670950.1 | 3231583-3232143 | 561 | - | hypothetical protein | - |
| 107 | NA | YP_670951.1 | 3232155-3232979 | 825 | - | hypothetical protein | - |