PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Escherichia coli APEC O1 (NC_008563)
Location : 237543 - 271625 bp
Size : 34083 bp
GC content : 50.8 %
GC bias (=GCregion - GCgenome) : 0.27 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1mltD YP_851406.1 237543-238901 1359 - membrane-bound lytic murein transglycosylase D-
2gloB YP_851407.1 238973-239728 756 - hydroxyacylglutathione hydrolase-
3yafS YP_851408.1 239744-240484 741 + S-adenosyl-L-methionine-dependent methyltransferase-
4rnhA YP_851409.1 240481-241059 579 - ribonuclease H-
5dnaQ YP_851410.1 241004-241744 741 + DNA polymerase III subunit epsilon-
6tRNA-Asp - 241877-241950 74 + tRNA-Asp-
7yafT YP_851412.1 242282-243067 786 + aminopeptidase-
8aec32 YP_851413.1 243407-243886 480 - hypothetical protein-
9aec31 YP_851414.1 243904-245403 1500 - hypothetical protein-
10aec30 YP_851415.1 245273-248800 3528 - hypothetical protein-
11aec29 YP_851416.1 248820-250262 1443 - hypothetical protein-
12aec28 YP_851417.1 250267-251010 744 - hypothetical protein-
13aec27 YP_851418.1 251007-253766 2760 - ATPaseVirulence
14aec26 YP_851419.1 253776-254540 765 - hypothetical protein-
15aec25 YP_851420.1 254545-255891 1347 - hypothetical proteinVirulence
16aec24 YP_851421.1 255894-256418 525 - hypothetical protein-
17aec23 YP_851422.1 256415-257707 1293 - hypothetical protein-
18aec22 YP_851423.1 257712-258761 1050 - hypothetical protein-
19NA YP_851424.1 258725-260575 1851 - hypothetical proteinVirulence
20aec19 YP_851425.1 260572-260997 426 - hypothetical protein-
21aec18 YP_851426.1 261002-262486 1485 - hypothetical proteinVirulence
22aec17 YP_851427.1 262509-263012 504 - hypothetical proteinVirulence
23aec16 YP_851428.1 263718-264236 519 + hypothetical protein-
24aec15 YP_851429.1 264457-266439 1983 + hypothetical protein-
25aec14 YP_851430.1 266546-267592 1047 + hypothetical protein-
26NA YP_851431.1 267585-269024 1440 + hypothetical protein-
27aec11 YP_851432.1 268999-269289 291 + hypothetical protein-
28yhhI YP_851433.1 269826-270311 486 + transposase-
29aec8 YP_851434.1 270540-271043 504 + hypothetical protein-
30aec7 YP_851435.1 271113-271625 513 + hypothetical protein-


tRNA-Asp PI: Esc.17aec32 aec31 aec30 aec29 aec27 aec26 aec25 aec24 aec23 aec22 aec19 aec18 aec17 aec16 aec15 aec14 aec11 aec8 aec7 PI: Esc.G2.NC_008563_P1APECO1_t03yafT aec32 aec31 aec30 aec29 aec28 aec27 aec26 aec25 aec24 aec23 aec22 APECO1_1761 aec19 aec18 aec17 aec16 aec15 aec14 APECO1_1753 aec11 yhhI aec8 aec7 PI: Pho.1mltD gloB orf71 rnhA dnaQ -orf23

• PAIs homologous to this region

AGI-1 (Escherichia coli BEN2908)
PAI II APEC-O1 (Escherichia coli APEC O1)
tcd island (Photorhabdus luminescens W14)