PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Yersinia pseudotuberculosis IP 31758 (NC_009708)
Location : 1591502 - 1609428 bp
Size : 17927 bp
GC content : 45.5 %
GC bias (=GCregion - GCgenome) : -2.03 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1NA YP_001400339.1 1591502-1592527 1026 - hypothetical protein-
2NA YP_001400340.1 1592527-1594407 1881 - hypothetical proteinVirulence
3NA YP_001400341.1 1595191-1597848 2658 + Clp protease-associated protein ClpBVirulence
4NA YP_001400342.1 1598059-1598604 546 + frimbrial protein-
5NA YP_001400343.1 1598761-1599522 762 + pili assembly chaperone-
6NA YP_001400344.1 1599821-1602322 2502 + fimbrial usher protein-
7NA YP_001400345.1 1602307-1602915 609 + fimbrial protein-
8NA YP_001400346.1 1603021-1603545 525 + hypothetical proteinVirulence
9NA YP_001400347.1 1603569-1605071 1503 + hypothetical proteinVirulence
10NA YP_001400348.1 1605404-1605889 486 + hypothetical proteinVirulence
11NA YP_001400349.1 1606163-1606702 540 + lipoprotein-
12NA YP_001400350.1 1606706-1608055 1350 + hypothetical protein-
13NA YP_001400351.1 1608052-1609428 1377 + OmpA domain-containing protein-