PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Escherichia coli K-12 (NC_010473)
Location : 496767 - 506559 bp
Size : 9793 bp
GC content : 47.0 %
GC bias (=GCregion - GCgenome) : -3.83 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1sfmA YP_001729433.1 496767-497309 543 + fimbrial-like adhesin proteinVirulence
2sfmC YP_001729434.1 497529-498221 693 + pilin chaperone, periplasmicVirulence
3sfmD YP_001729435.1 498252-500855 2604 + outer membrane export usher proteinVirulence
4sfmH YP_001729436.1 500891-501874 984 + fimbrial-like adhesin proteinVirulence
5sfmF YP_001729437.1 501885-502400 516 + putative fimbrial proteinVirulence
6fimZ YP_001729438.1 502403-503035 633 - transcriptional regulator FimZVirulence
7tRNA-Arg - 503278-503354 77 + tRNA-Arg-
8intD YP_001729439.1 503370-504533 1164 - DLP12 prophage; integrase-
9ybcC YP_001729440.1 504653-504916 264 - DLP12 prophage; exonuclease-
10ybcD - 505006-505242 237 + --
11insE-3 YP_001729441.1 505388-505696 309 + DLP12 prophage; IS3 element protein InsE-
12insF-3 YP_001729442.1 505693-506559 867 + DLP12 prophage; IS3 element protein InsF-


tRNA-Arg