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Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Escherichia coli SMS-3-5 (NC_010498) Location : 3251173 - 3266533 bp Size : 15361 bp GC content : 51.7 % GC bias (=GCregion - GCgenome) : 1.18 % |
No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
1 | sitA_2 | YP_001745164.1 | 3251173-3252087 | 915 | + | iron/manganese transport system periplasmic binding protein SitA | Virulence |
2 | sitB_2 | YP_001745165.1 | 3252087-3252914 | 828 | + | iron/manganese transport system inner membrane protein SitB | Virulence |
3 | sitC_2 | YP_001745166.1 | 3252911-3253768 | 858 | + | iron/manganese transport system inner membrane protein SitC | Virulence |
4 | sitD_2 | YP_001745167.1 | 3253765-3254643 | 879 | + | iron/manganese transport system membrane protein SitD | Virulence |
5 | NA | - | 3255458-3255634 | 177 | + | - | - |
6 | NA | - | 3255952-3256290 | 339 | + | - | - |
7 | NA | - | 3256356-3256901 | 546 | + | - | - |
8 | NA | - | 3256932-3257168 | 237 | + | - | - |
9 | iutA | YP_001745168.1 | 3257233-3259434 | 2202 | - | ferric aerobactin receptor IutA | Virulence |
10 | iucD | YP_001745169.1 | 3259516-3260793 | 1278 | - | L-lysine 6-monooxygenase IucD | Virulence |
11 | iucC | YP_001745170.1 | 3260790-3262532 | 1743 | - | aerobactin siderophore biosynthesis protein IucC | Virulence |
12 | iucB | YP_001745171.1 | 3262532-3263479 | 948 | - | aerobactin siderophore biosynthesis protein IucB | Virulence |
13 | iucA | YP_001745172.1 | 3263480-3265204 | 1725 | - | aerobactin siderophore biosynthesis protein IucA | Virulence |
14 | shiF | YP_001745173.1 | 3265340-3266533 | 1194 | + | transport protein ShiF | Virulence |