PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Yersinia pseudotuberculosis PB1/+ (NC_010634)
Location : 4560622 - 4571204 bp
Size : 10583 bp
GC content : 46.6 %
GC bias (=GCregion - GCgenome) : -0.88 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1NA YP_001874483.1 4560622-4561380 759 + ABC transporter-like proteinVirulence
2NA YP_001874484.1 4561377-4561877 501 - hypothetical protein-
3NA - 4561819-4562145 327 - --
4NA YP_001874485.1 4562168-4562575 408 - hypothetical protein-
5NA - 4562810-4563082 273 - --
6NA YP_001874486.1 4563457-4564314 858 - hypothetical proteinVirulence
7NA YP_001874487.1 4564538-4565002 465 - hypothetical proteinVirulence
8NA YP_001874488.1 4564959-4565294 336 - hypothetical proteinVirulence
9NA YP_001874489.1 4565306-4565785 480 - DNA repair protein RadCVirulence
10NA YP_001874490.1 4565968-4566588 621 - hypothetical protein-
11NA YP_001874491.1 4566616-4567170 555 - hypothetical protein-
12NA YP_001874492.1 4567418-4568089 672 - hypothetical protein-
13NA YP_001874493.1 4568143-4568472 330 - IstB ATP binding domain-containing protein-
14NA YP_001874494.1 4569101-4569352 252 + hypothetical protein-
15NA YP_001874495.1 4569403-4570182 780 - transposase/IS protein-
16NA YP_001874496.1 4570182-4571204 1023 - Integrase catalytic subunit-