PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Salmonella enterica SL254 (NC_011080)
Location : 346737 - 355864 bp
Size : 9128 bp
GC content : 47.6 %
GC bias (=GCregion - GCgenome) : -4.63 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1NA YP_002039540.2 346737-347234 498 + saf-pilin pilus formation protein-
2NA YP_002039541.1 347309-348049 741 + periplasmic fimbrial chaperone proteinVirulence
3NA YP_002039542.1 348073-350583 2511 + outer-membrane fimbrial usher proteinVirulence
4NA YP_002039543.1 350605-351075 471 + fimbrial structural subunit-
5NA YP_002039544.1 351483-352304 822 + polysaccharide deacetylaseVirulence
6NA YP_002039545.1 352787-352918 132 + hypothetical protein-
7NA YP_002039546.1 353121-354068 948 + LysR family transcriptional regulator SinR-
8NA YP_002039547.1 354188-354403 216 + hypothetical protein-
9NA YP_002039548.1 354407-355126 720 - adhesin-
10NA YP_002039549.1 355151-355279 129 - hypothetical protein-
11NA YP_002039550.1 355457-355864 408 - hypothetical protein-