PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Salmonella enterica SL476 (NC_011083)
Location : 302594 - 341141 bp
Size : 38548 bp
GC content : 53.4 %
GC bias (=GCregion - GCgenome) : 1.27 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1tRNA-Asp - 302594-302672 79 + tRNA-Asp-
2dkgB YP_002044239.1 302815-303639 825 + 2,5-diketo-D-gluconate reductase B-
3NA YP_002044240.1 303660-304574 915 - LysR substrate binding domain-containing protein-
4NA YP_002044241.1 304679-305854 1176 + inner membrane transport protein YdhP-
5NA YP_002044242.1 305986-306786 801 + hypothetical protein-
6NA YP_002044243.1 306864-307634 771 + UbiE/COQ5 family methyltransferase-
7mltD YP_002044244.2 307690-309057 1368 - membrane-bound lytic murein transglycosylase D-
8gloB YP_002044245.1 309129-309884 756 - hydroxyacylglutathione hydrolase-
9NA YP_002044246.1 309919-310641 723 + methyltransferase-
10rnhA YP_002044247.1 310638-311105 468 - ribonuclease H-
11dnaQ YP_002044248.1 311160-311900 741 + DNA polymerase III subunit epsilon-
12tRNA-Asp - 312033-312111 79 + tRNA-Asp-
13NA YP_002044249.1 312432-313481 1050 - ImpA-related N- family protein-
14NA YP_002044250.1 313498-314493 996 - type VI secretion protein, family-
15vasA YP_002044251.1 314490-316373 1884 - type VI secretion protein, familyVirulence
16NA YP_002044252.1 316389-316883 495 - type VI secretion system lysozyme-like protein-
17NA YP_002044253.1 316880-317704 825 - hypothetical protein-
18NA YP_002044254.1 317691-318581 891 - hypothetical protein-
19clpV YP_002044255.1 318961-321600 2640 + type VI secretion ATPase, ClpV1 familyVirulence
20NA YP_002044256.1 321700-322242 543 + type VI secretion protein, familyVirulence
21NA YP_002044257.1 322266-323774 1509 + type VI secretion protein, EvpB/familyVirulence
22NA YP_002044258.1 324200-324625 426 + hypothetical protein-
23NA YP_002044259.1 324862-325347 486 + hemolysin-coregulated proteinVirulence
24NA YP_002044260.1 325650-326135 486 + hypothetical protein-
25NA YP_002044261.1 326171-326503 333 + hypothetical protein-
26NA YP_002044262.1 326646-327131 486 + hemolysin-coregulated proteinVirulence
27NA YP_002044263.1 327244-327735 492 + type VI secretion lipoprotein, family-
28NA YP_002044264.1 327739-329082 1344 + type VI secretion protein, family-
29NA YP_002044265.1 329079-330383 1305 + hypothetical protein-
30NA YP_002044266.1 330388-331161 774 + hypothetical protein-
31NA YP_002044267.2 331352-331795 444 + shiga-like toxin A subunit-
32icmF YP_002044268.1 331829-335698 3870 + type VI secretion protein IcmF-
33NA YP_002044269.1 335698-336465 768 + hypothetical protein-
34NA YP_002044270.1 337068-337424 357 + hypothetical protein-
35NA YP_002044271.1 337433-337555 123 + hypothetical protein-
36NA YP_002044272.1 337582-337968 387 + hypothetical protein-
37NA YP_002044273.1 337995-338513 519 + hypothetical protein-
38NA YP_002044274.1 338910-341141 2232 + Rhs family protein-


tRNA-Asp tRNA-Asp