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Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Helicobacter pylori G27 (NC_011333) Location : 505725 - 553409 bp Size : 47685 bp GC content : 36.3 % GC bias (=GCregion - GCgenome) : -2.62 % |
No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
1 | NA | YP_002266098.1 | 505725-505895 | 171 | + | urease-enhancing factor | - |
2 | NA | YP_002266099.1 | 505924-506085 | 162 | + | hypothetical protein | - |
3 | glnA | YP_002266100.1 | 506148-507593 | 1446 | - | glutamine synthetase | Virulence |
4 | NA | YP_002266101.1 | 507816-508112 | 297 | + | hypothetical protein | - |
5 | rplI | YP_002266102.1 | 508582-509031 | 450 | + | 50S ribosomal protein L9 | - |
6 | NA | YP_002266103.1 | 509035-509577 | 543 | + | ATP-dependent protease peptidase subunit | - |
7 | hslU | YP_002266104.1 | 509577-510908 | 1332 | + | ATP-dependent protease ATP-binding subunit HslU | - |
8 | era | YP_002266105.1 | 510908-511813 | 906 | + | GTP-binding protein Era | - |
9 | NA | YP_002266106.1 | 511810-512802 | 993 | + | hypothetical protein | - |
10 | NA | YP_002266107.1 | 512885-513766 | 882 | - | hypothetical protein | - |
11 | cag1 | YP_002266108.1 | 513910-514257 | 348 | + | cag pathogenicity island protein 1 | Virulence |
12 | NA | YP_002266109.1 | 514464-514715 | 252 | + | hypothetical protein | Virulence |
13 | cag3 | YP_002266110.1 | 514715-516160 | 1446 | + | cag pathogenicity island protein 3 | Virulence |
14 | cag4 | YP_002266111.1 | 516165-516674 | 510 | + | cag pathogenicity island protein 4 | Virulence |
15 | cag5 | YP_002266112.1 | 516793-519039 | 2247 | - | cag pathogenicity island protein 5 | Virulence |
16 | NA | YP_002266113.1 | 519048-520040 | 993 | - | virB11-like cag pathogenicity islandencoded protein / ATPase | Virulence |
17 | cagZ | YP_002266114.1 | 520045-520644 | 600 | - | cag pathogenicity island protein Z | Virulence |
18 | cagX | YP_002266115.1 | 526506-528071 | 1566 | - | cag pathogenicity island protein X | Virulence |
19 | cagW | YP_002266116.1 | 528123-529730 | 1608 | - | cag pathogenicity island protein W | Virulence |
20 | cagV | YP_002266117.1 | 529735-530493 | 759 | - | cag pathogenicity island protein V | Virulence |
21 | cagU | YP_002266118.1 | 530890-531540 | 651 | + | cag pathogenicity island protein U | Virulence |
22 | cagT | YP_002266119.1 | 531553-532395 | 843 | + | cag pathogenicity island protein T | Virulence |
23 | cagS | YP_002266120.1 | 532592-533191 | 600 | - | cag pathogenicity island protein S | Virulence |
24 | NA | - | 533594-533965 | 372 | - | - | - |
25 | NA | - | 534035-534382 | 348 | + | - | - |
26 | NA | - | 534457-535317 | 861 | + | - | - |
27 | cagQ | YP_002266121.1 | 535518-535823 | 306 | - | cag pathogenicity island protein Q | - |
28 | NA | YP_002266122.1 | 535835-536014 | 180 | - | hypothetical protein | - |
29 | cagM | YP_002266123.1 | 537100-538230 | 1131 | + | cag pathogenicity island protein M | Virulence |
30 | cagN | YP_002266124.1 | 538245-539165 | 921 | + | cag pathogenicity island protein N | Virulence |
31 | cagL | YP_002266125.1 | 539247-539960 | 714 | - | cag pathogenicity island protein L | Virulence |
32 | cagI | YP_002266126.1 | 539957-541033 | 1077 | - | cag pathogenicity island protein I | Virulence |
33 | cagH | YP_002266127.1 | 541113-542045 | 933 | - | cag pathogenicity island protein H | Virulence |
34 | NA | YP_002266128.1 | 542044-542244 | 201 | + | hypothetical protein | - |
35 | cagG | YP_002266129.1 | 542241-542669 | 429 | - | cag pathogenicity island protein G | Virulence |
36 | cagF | YP_002266130.1 | 542724-543530 | 807 | - | cag pathogenicity island protein F | Virulence |
37 | cagE | YP_002266131.1 | 543532-546483 | 2952 | - | cag pathogenicity island protein E | Virulence |
38 | cagD | YP_002266132.1 | 546492-547115 | 624 | - | cag pathogenicity island protein D | Virulence |
39 | cagC | YP_002266133.1 | 547117-547464 | 348 | - | cag pathogenicity island protein C | Virulence |
40 | cagB | YP_002266134.1 | 547609-547836 | 228 | - | cag pathogenicity island protein B | Virulence |
41 | cagA | YP_002266135.1 | 548263-551955 | 3693 | + | cytotoxin-associated protein A | Virulence |
42 | NA | YP_002266136.1 | 552282-552584 | 303 | + | hypothetical protein | - |
43 | NA | YP_002266137.1 | 552642-553409 | 768 | - | glutamate racemase | - |