Home PAIs REIs Genomes Search Links |
|
Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Helicobacter pylori P12 (NC_011498) Location : 543478 - 590538 bp Size : 47061 bp GC content : 36.3 % GC bias (=GCregion - GCgenome) : -2.51 % |
No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
1 | glnA | YP_002301152.1 | 543478-544923 | 1446 | - | glutamine synthetase | Virulence |
2 | NA | YP_002301153.1 | 545061-547148 | 2088 | + | hypothetical protein | - |
3 | rplI | YP_002301154.1 | 547211-547660 | 450 | + | 50S ribosomal protein L9 | - |
4 | hslV | YP_002301155.1 | 547664-548206 | 543 | + | ATP-dependent protease peptidase subunit | - |
5 | hslU | YP_002301156.1 | 548206-549537 | 1332 | + | ATP-dependent protease ATP-binding subunit HslU | - |
6 | era | YP_002301157.1 | 549537-550442 | 906 | + | GTP-binding protein Era | - |
7 | NA | YP_002301158.1 | 550439-551431 | 993 | + | hypothetical protein | - |
8 | NA | YP_002301159.1 | 551520-552374 | 855 | - | hypothetical protein | - |
9 | NA | YP_002301160.1 | 552393-552584 | 192 | + | hypothetical protein | - |
10 | cag1 | YP_002301161.1 | 552705-553052 | 348 | + | cag pathogenicity island protein Zeta | Virulence |
11 | cag2 | YP_002301162.1 | 553160-553525 | 366 | + | cag pathogenicity island protein Epsilon | Virulence |
12 | cag3 | YP_002301163.1 | 553525-554970 | 1446 | + | cag pathogenicity island protein Delta | Virulence |
13 | cag4 | YP_002301164.1 | 554980-555489 | 510 | + | cag pathogenicity island protein Gamma | Virulence |
14 | cag5 | YP_002301165.1 | 555963-558209 | 2247 | - | cag pathogenicity island protein Beta | Virulence |
15 | virB11-2 | YP_002301166.1 | 558218-559210 | 993 | - | cag pathogenicity island protein Alpha | Virulence |
16 | cagZ | YP_002301167.1 | 559215-559814 | 600 | - | cag pathogenicity island protein Z | Virulence |
17 | cagY | YP_002301168.1 | 559964-565669 | 5706 | - | cag pathogenicity island protein Y VirB10-like protein | Virulence |
18 | cagX | YP_002301169.1 | 565684-567252 | 1569 | - | cag pathogenicity island protein X VirB9-like protein | Virulence |
19 | cagW | YP_002301170.1 | 567305-568912 | 1608 | - | cag pathogenicity island protein W | Virulence |
20 | cagV | YP_002301171.1 | 568917-569675 | 759 | - | cag pathogenicity island protein V | Virulence |
21 | cagU | YP_002301172.1 | 570070-570720 | 651 | + | cag pathogenicity island protein U | Virulence |
22 | cagT | YP_002301173.1 | 570733-571575 | 843 | + | cag pathogenicity island protein T | Virulence |
23 | cagS | YP_002301174.1 | 571777-572376 | 600 | - | cag pathogenicity island protein S | Virulence |
24 | cagQ | YP_002301175.1 | 572815-573195 | 381 | - | cag pathogenicity island protein Q | Virulence |
25 | cagR | YP_002301176.1 | 572903-573205 | 303 | + | cag pathogenicity island protein R | Virulence |
26 | cagP | YP_002301177.1 | 573621-573974 | 354 | - | cag pathogenicity island protein P | Virulence |
27 | cagM | YP_002301178.1 | 574409-575539 | 1131 | + | cag pathogenicity island protein M | Virulence |
28 | cagN | YP_002301179.1 | 575554-576474 | 921 | + | cag pathogenicity island protein N | Virulence |
29 | cagL | YP_002301180.1 | 576555-577268 | 714 | - | cag pathogenicity island protein L | Virulence |
30 | cagI | YP_002301181.1 | 577265-578410 | 1146 | - | cag pathogenicity island protein I | Virulence |
31 | cagH | YP_002301182.1 | 578421-579533 | 1113 | - | cag pathogenicity island protein H | Virulence |
32 | cagG | YP_002301183.1 | 579550-579978 | 429 | - | cag pathogenicity island protein G | Virulence |
33 | cagF | YP_002301184.1 | 580037-580843 | 807 | - | cag pathogenicity island protein F | Virulence |
34 | cagE | YP_002301185.1 | 580845-583796 | 2952 | - | cag pathogenicity island protein E VirB4-like protein | Virulence |
35 | cagD | YP_002301186.1 | 583805-584428 | 624 | - | cag pathogenicity island protein D | Virulence |
36 | cagC | YP_002301187.1 | 584430-584777 | 348 | - | cag pathogenicity island protein C | Virulence |
37 | cagB | YP_002301188.1 | 584923-585150 | 228 | - | cag pathogenicity island protein B | Virulence |
38 | cagA | YP_002301189.1 | 585581-589225 | 3645 | + | cytotoxin-associated protein A | Virulence |
39 | NA | YP_002301190.1 | 589771-590538 | 768 | - | glutamate racemase | - |