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Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Escherichia coli IAI1 (NC_011741) Location : 3180271 - 3216114 bp Size : 35844 bp GC content : 52.7 % GC bias (=GCregion - GCgenome) : 1.87 % |
No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
1 | tRNA-Phe | - | 3180271-3180346 | 76 | + | tRNA-Phe | - |
2 | yghD | YP_002388440.1 | 3180495-3181031 | 537 | - | putative general secretion pathway protein YghD | Virulence |
3 | yghE | YP_002388441.1 | 3181033-3182211 | 1179 | - | GspL-like protein | Virulence |
4 | NA | YP_002388442.1 | 3182208-3183185 | 978 | - | putative type II secretion protein | Virulence |
5 | NA | YP_002388443.1 | 3183188-3183787 | 600 | - | hypothetical protein | Virulence |
6 | NA | YP_002388444.1 | 3183784-3184155 | 372 | - | putative type II secretion protein | Virulence |
7 | NA | YP_002388445.1 | 3184152-3184715 | 564 | - | hypothetical protein | Virulence |
8 | NA | YP_002388446.1 | 3184719-3185201 | 483 | - | putative general secretion pathway protein G | Virulence |
9 | epsF | YP_002388447.1 | 3185191-3186414 | 1224 | - | General secretion pathway protein F | Virulence |
10 | epsE | YP_002388448.1 | 3186414-3187907 | 1494 | - | general secretion pathway protein E | Virulence |
11 | epsD | YP_002388449.1 | 3187907-3189967 | 2061 | - | general secretion pathway protein D | Virulence |
12 | yghF | YP_002388450.1 | 3189997-3190956 | 960 | - | putative type II secretion protein GspC | Virulence |
13 | yghG | YP_002388451.1 | 3190974-3191384 | 411 | - | hypothetical protein | - |
14 | pppA | YP_002388452.1 | 3191450-3192259 | 810 | - | bifunctional prepilin leader peptidase and methylase | - |
15 | yghJ | YP_002388453.1 | 3192399-3196976 | 4578 | - | inner membrane lipoprotein | Virulence |
16 | NA | YP_002388454.1 | 3197124-3197309 | 186 | + | hypothetical protein | - |
17 | yghK | YP_002388455.1 | 3197461-3199143 | 1683 | - | glycolate transporter | - |
18 | glcB | YP_002388456.1 | 3199499-3201670 | 2172 | - | malate synthase G | - |
19 | glcG | YP_002388457.1 | 3201692-3202096 | 405 | - | hypothetical protein | - |
20 | glcF | YP_002388458.1 | 3202101-3203324 | 1224 | - | glycolate oxidase iron-sulfur subunit | - |
21 | glcE | YP_002388459.1 | 3203335-3204387 | 1053 | - | glycolate oxidase FAD binding subunit | - |
22 | glcD | YP_002388460.1 | 3204387-3205886 | 1500 | - | glycolate oxidase subunit GlcD | - |
23 | glcC | YP_002388461.1 | 3206137-3206901 | 765 | + | DNA-binding transcriptional regulator GlcC | - |
24 | yghO | YP_002388462.1 | 3206908-3208050 | 1143 | - | putative DNA-binding transcriptional regulator | - |
25 | NA | - | 3208394-3210142 | 1749 | + | - | - |
26 | NA | YP_002388463.1 | 3209929-3211053 | 1125 | + | putative epimerase | - |
27 | NA | YP_002388464.1 | 3211085-3211333 | 249 | + | hypothetical protein | - |
28 | NA | YP_002388465.1 | 3211333-3212505 | 1173 | + | putative 8-amino-7-oxononanoate synthase | - |
29 | NA | YP_002388466.1 | 3212541-3213701 | 1161 | - | hypothetical protein | - |
30 | NA | YP_002388467.1 | 3213617-3214687 | 1071 | - | hypothetical protein | - |
31 | NA | YP_002388468.1 | 3214718-3215281 | 564 | - | putative transcriptional regulator | - |
32 | NA | YP_002388469.1 | 3215290-3216114 | 825 | - | hypothetical protein | - |