PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Escherichia coli S88 (NC_011742)
Location : 295064 - 303571 bp
Size : 8508 bp
GC content : 43.6 %
GC bias (=GCregion - GCgenome) : -7.05 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1tRNA-Thr - 295064-295139 76 + tRNA-Thr-
2NA YP_002390113.1 295294-295632 339 + CP4-like integrase-
3vat YP_002390114.1 296717-300847 4131 - Vacuolating autotransporter toxinVirulence
4NA YP_002390115.1 301440-301655 216 + transposase InsA (ORF1) IS1-
5NA YP_002390116.1 301957-302133 177 + transposase InsB (ORF1) IS1 (Fragment)-
6NA YP_002390117.1 302512-302742 231 + hypothetical protein-
7yagU YP_002390118.1 302957-303571 615 + hypothetical protein-


tRNA-Thr