PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Escherichia coli 55989 (NC_011748)
Location : 229562 - 265332 bp
Size : 35771 bp
GC content : 51.4 %
GC bias (=GCregion - GCgenome) : 0.78 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1tRNA-Asp - 229562-229638 77 + tRNA-Asp-
2dkgB YP_002401335.1 229800-230603 804 + 2,5-diketo-D-gluconate reductase B-
3NA YP_002401336.1 230714-231922 1209 + transposase, IS4 family, IS10L-
4yafC YP_002401337.1 231938-232852 915 - DNA-binding transcriptional regulator-
5yafD YP_002401338.1 233093-233893 801 + hypothetical protein-
6yafE YP_002401339.1 233971-234741 771 + S-adenosyl-L-methionine-dependent methyltransferase-
7mltD YP_002401340.1 234789-236147 1359 - membrane-bound lytic murein transglycosylase D-
8gloB YP_002401341.1 236219-236974 756 - hydroxyacylglutathione hydrolase-
9yafS YP_002401342.1 237008-237730 723 + S-adenosyl-L-methionine-dependent methyltransferase-
10rnhA YP_002401343.1 237727-238194 468 - ribonuclease H-
11dnaQ YP_002401344.1 238259-238990 732 + DNA polymerase III subunit epsilon-
12tRNA-Asp - 239123-239199 77 + tRNA-Asp-
13yafT YP_002401345.1 239526-240311 786 + aminopeptidase-
14yafU YP_002401346.1 240937-241866 930 - hypothetical protein-
15NA YP_002401347.1 241895-242377 483 - hypothetical protein-
16NA YP_002401348.1 242401-243843 1443 - hypothetical protein-
17NA YP_002401349.1 243764-247288 3525 - IcmF-like protein-
18NA YP_002401350.1 247307-248788 1482 - hypothetical protein-
19NA YP_002401351.1 248727-249470 744 - hypothetical protein-
20NA YP_002401352.1 249467-252340 2874 - ATP-dependent Clp proteinase Aec27 ATP-binding chain, with chaperone activityVirulence
21NA YP_002401353.1 252235-252996 762 - membrane protein Aec26-
22NA YP_002401354.1 253001-254332 1332 - hypothetical proteinVirulence
23NA YP_002401355.1 254335-254859 525 - hypothetical protein-
24NA YP_002401356.1 254856-256157 1302 - hypothetical protein-
25NA YP_002401357.1 256161-257249 1089 - hypothetical proteinVirulence
26NA YP_002401358.1 257207-259057 1851 - hypothetical proteinVirulence
27NA YP_002401359.1 259061-259474 414 - hypothetical protein-
28NA YP_002401360.1 259481-260956 1476 - hypothetical proteinVirulence
29NA YP_002401361.1 261007-261231 225 - hypothetical protein-
30NA YP_002401362.1 261266-261766 501 - hypothetical proteinVirulence
31NA YP_002401363.1 262193-262336 144 + hypothetical protein-
32NA YP_002401364.1 262463-262981 519 + hypothetical protein-
33NA YP_002401365.1 263191-265332 2142 + hypothetical protein-


tRNA-Asp tRNA-Asp