Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Escherichia coli 55989 (NC_011748) Location : 3429643 - 3482331 bp Size : 52689 bp GC content : 52.2 % GC bias (=GCregion - GCgenome) : 1.58 % |
No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
1 | NA | YP_002404307.1 | 3429643-3429834 | 192 | + | hypothetical protein | - |
2 | NA | YP_002404308.1 | 3429887-3430195 | 309 | - | hypothetical protein | Virulence |
3 | NA | YP_002404309.1 | 3430216-3430875 | 660 | - | hypothetical protein | Virulence |
4 | NA | YP_002404310.1 | 3431148-3431621 | 474 | - | hypothetical protein | Virulence |
5 | NA | YP_002404311.1 | 3431557-3431946 | 390 | - | hypothetical protein | Virulence |
6 | NA | YP_002404312.1 | 3432108-3432677 | 570 | - | hypothetical protein | Virulence |
7 | NA | YP_002404313.1 | 3432881-3433054 | 174 | + | hypothetical protein | - |
8 | NA | YP_002404314.1 | 3432924-3433127 | 204 | - | hypothetical protein | - |
9 | NA | YP_002404315.1 | 3433294-3433506 | 213 | - | hemolysin expression-modulating protein | Virulence |
10 | NA | - | 3434133-3434411 | 279 | + | - | - |
11 | NA | YP_002404316.1 | 3434470-3435069 | 600 | + | hypothetical protein | Virulence |
12 | NA | YP_002404317.1 | 3435055-3435291 | 237 | - | hypothetical protein | - |
13 | NA | YP_002404318.1 | 3436564-3437583 | 1020 | + | hypothetical protein | Virulence |
14 | NA | YP_002404319.1 | 3437654-3438565 | 912 | + | GTPase | Virulence |
15 | flu | YP_002404320.1 | 3438893-3442018 | 3126 | + | antigen 43 (Ag43) phase-variable biofilm formation autotransporter; CP4-44 prophage | Virulence |
16 | NA | YP_002404321.1 | 3442133-3444655 | 2523 | + | membrane protein, yeeR | Virulence |
17 | NA | YP_002404322.1 | 3444731-3445186 | 456 | + | hypothetical protein | Virulence |
18 | NA | YP_002404323.1 | 3445265-3445498 | 234 | + | hypothetical protein | Virulence |
19 | NA | YP_002404324.1 | 3445598-3446416 | 819 | + | hypothetical protein | Virulence |
20 | NA | - | 3446718-3447191 | 474 | + | - | - |
21 | yeeS | YP_002404325.1 | 3447237-3447683 | 447 | + | DNA repair protein; CP4-44 prophage | Virulence |
22 | yeeT | YP_002404326.1 | 3447770-3447991 | 222 | + | CP4-44 prophage | Virulence |
23 | yeeU | YP_002404327.1 | 3448071-3448448 | 378 | + | antitoxin of the YeeV-YeeU toxin-antitoxin system; CP4-44 prophage | Virulence |
24 | yeeV | YP_002404328.1 | 3448390-3448872 | 483 | + | toxin of the YeeV-YeeU toxin-antitoxin system | Virulence |
25 | yeeW | YP_002404329.1 | 3448869-3449291 | 423 | + | hypothetical protein | - |
26 | NA | YP_002404330.1 | 3449376-3450218 | 843 | + | hypothetical protein | Virulence |
27 | yghD | YP_002404331.1 | 3450499-3451035 | 537 | - | general secretion pathway protein YghD | Virulence |
28 | yghE | YP_002404332.1 | 3451037-3452215 | 1179 | - | GspL-like protein | Virulence |
29 | NA | YP_002404333.1 | 3452212-3453189 | 978 | - | type II secretion protein (GspK-like) | Virulence |
30 | NA | YP_002404334.1 | 3453192-3453791 | 600 | - | hypothetical protein | Virulence |
31 | NA | YP_002404335.1 | 3453788-3454159 | 372 | - | type II secretion protein (GspI-like) | Virulence |
32 | NA | YP_002404336.1 | 3454156-3454719 | 564 | - | hypothetical protein | Virulence |
33 | NA | YP_002404337.1 | 3454723-3455205 | 483 | - | general secretion pathway protein G precursor (epsG-like) | Virulence |
34 | epsF | YP_002404338.1 | 3455195-3456418 | 1224 | - | General secretion pathway protein F | Virulence |
35 | epsE | YP_002404339.1 | 3456418-3457911 | 1494 | - | general secretion pathway protein E | Virulence |
36 | epsD | YP_002404340.1 | 3457911-3459971 | 2061 | - | general secretion pathway protein D | Virulence |
37 | yghF | YP_002404341.1 | 3460001-3460960 | 960 | - | type II secretion protein GspC | Virulence |
38 | yghG | YP_002404342.1 | 3460978-3461388 | 411 | - | hypothetical protein | - |
39 | pppA | YP_002404343.1 | 3461454-3462263 | 810 | - | bifunctional prepilin leader peptidase and methylase | - |
40 | yghJ | YP_002404344.1 | 3462403-3466986 | 4584 | - | inner membrane lipoprotein | Virulence |
41 | NA | YP_002404345.1 | 3467116-3467328 | 213 | + | hypothetical protein | - |
42 | yghK | YP_002404346.1 | 3467454-3469136 | 1683 | - | glycolate transporter | - |
43 | glcB | YP_002404347.1 | 3469492-3471663 | 2172 | - | malate synthase G | - |
44 | glcG | YP_002404348.1 | 3471685-3472089 | 405 | - | hypothetical protein | - |
45 | glcF | YP_002404349.1 | 3472094-3473317 | 1224 | - | glycolate oxidase iron-sulfur subunit | - |
46 | glcE | YP_002404350.1 | 3473328-3474380 | 1053 | - | glycolate oxidase FAD binding subunit | - |
47 | glcD | YP_002404351.1 | 3474380-3475879 | 1500 | - | glycolate oxidase subunit GlcD | - |
48 | glcC | - | 3476070-3476726 | 657 | + | - | - |
49 | NA | YP_002404352.1 | 3476720-3477223 | 504 | - | transposase ORF B IS1 | - |
50 | insA | YP_002404353.1 | 3477142-3477417 | 276 | - | IS1 repressor protein InsA | - |
51 | NA | - | 3477459-3477551 | 93 | + | - | - |
52 | NA | YP_002404354.1 | 3477551-3478723 | 1173 | + | 8-amino-7-oxononanoate synthase | - |
53 | NA | YP_002404355.1 | 3478758-3479918 | 1161 | - | hypothetical protein | - |
54 | NA | YP_002404356.1 | 3479834-3480904 | 1071 | - | hypothetical protein | - |
55 | NA | YP_002404357.1 | 3480935-3481498 | 564 | - | transcriptional regulator | - |
56 | NA | YP_002404358.1 | 3481507-3482331 | 825 | - | hypothetical protein | - |