Home PAIs REIs Genomes Search Links |
|
Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Escherichia coli IAI39 (NC_011750) Location : 4361791 - 4395843 bp Size : 34053 bp GC content : 49.0 % GC bias (=GCregion - GCgenome) : -1.59 % |
No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
1 | NA | YP_002410064.1 | 4361791-4362975 | 1185 | + | putative prophage integrase | - |
2 | NA | YP_002410065.1 | 4362996-4363151 | 156 | + | hypothetical protein | - |
3 | NA | YP_002410066.1 | 4363387-4364430 | 1044 | + | SHI-2 pathogenicity island protein | Virulence |
4 | NA | YP_002410067.1 | 4364781-4366283 | 1503 | - | putative membrane-associated, metal-dependent hydrolase | Virulence |
5 | tia | YP_002410068.1 | 4366458-4367213 | 756 | - | Tia invasion determinant | Virulence |
6 | NA | YP_002410069.1 | 4367382-4367612 | 231 | + | putative Prophage integrase (fragment) | - |
7 | NA | YP_002410070.1 | 4367761-4368159 | 399 | + | hypothetical protein | - |
8 | NA | YP_002410071.1 | 4369119-4370618 | 1500 | - | putative Na+/H+ antiporter | - |
9 | NA | YP_002410072.1 | 4370563-4371855 | 1293 | - | putative Aspartate transaminase | Virulence |
10 | NA | YP_002410073.1 | 4372215-4372541 | 327 | + | transposase ORF A, IS629 | - |
11 | NA | YP_002410074.1 | 4372538-4373020 | 483 | + | transposase ORF B (fragment), IS629 | - |
12 | NA | YP_002410075.1 | 4373612-4375135 | 1524 | + | Group II intron-encoded reverse transcriptase/maturase | Virulence |
13 | NA | YP_002410076.1 | 4375252-4375698 | 447 | + | transposase ORF B (fragment), IS629 | - |
14 | NA | YP_002410077.1 | 4375988-4376566 | 579 | + | putative transcriptional regulator | Virulence |
15 | NA | YP_002410078.1 | 4376589-4377407 | 819 | + | putative transcriptionnal regulator | Virulence |
16 | NA | YP_002410079.1 | 4377395-4377925 | 531 | + | hypothetical protein | Virulence |
17 | NA | YP_002410080.1 | 4377922-4378086 | 165 | - | hypothetical protein | - |
18 | NA | YP_002410081.1 | 4378394-4378723 | 330 | + | putative propanediol utilization protein PduJ/pduA | Virulence |
19 | NA | YP_002410082.1 | 4378741-4379025 | 285 | + | putative Propanediol utilization protein pduA/pduJ | Virulence |
20 | NA | YP_002410083.1 | 4379040-4379318 | 279 | + | putative propanediol utilization protein: polyhedral bodies pduJ or pduA | Virulence |
21 | adhE | - | 4379357-4380958 | 1602 | + | - | - |
22 | NA | YP_002410084.1 | 4380985-4381242 | 258 | + | putative ethanolamine utilization protein EutN/carboxysome structural protein Ccml | Virulence |
23 | adhE | - | 4381246-4382412 | 1167 | + | - | - |
24 | NA | YP_002410085.1 | 4382403-4385825 | 3423 | + | putative Formate C-acetyltransferase (Pyruvate formate-lyase) | Virulence |
25 | NA | YP_002410086.1 | 4385877-4386824 | 948 | + | putative pyruvate formate-lyase activating enzyme | Virulence |
26 | NA | YP_002410087.1 | 4386836-4387300 | 465 | + | putative microcompartments protein | Virulence |
27 | NA | YP_002410088.1 | 4387297-4387917 | 621 | + | hypothetical protein | Virulence |
28 | NA | YP_002410089.1 | 4387929-4388594 | 666 | + | hypothetical protein | Virulence |
29 | NA | YP_002410090.1 | 4388627-4389028 | 402 | + | putative membrane transport protein | Virulence |
30 | NA | YP_002410091.1 | 4389038-4389373 | 336 | + | putative multidrug resistance protein | Virulence |
31 | NA | YP_002410092.1 | 4389597-4389929 | 333 | - | transposase ORF B (fragment), IS629 | - |
32 | dsdC | YP_002410093.1 | 4390023-4390973 | 951 | - | DNA-binding transcriptional regulator DsdC | Virulence |
33 | dsdX | YP_002410094.1 | 4391185-4392522 | 1338 | + | permease DsdX | Virulence |
34 | dsdA | YP_002410095.1 | 4392540-4393871 | 1332 | + | D-serine dehydratase | Virulence |
35 | NA | YP_002410096.1 | 4394142-4394378 | 237 | - | putative phage regulatory protein | Virulence |
36 | NA | YP_002410097.1 | 4394447-4395049 | 603 | - | hypothetical protein | Virulence |
37 | NA | YP_002410098.1 | 4395277-4395843 | 567 | - | hypothetical protein | Virulence |