Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Escherichia coli IAI39 (NC_011750) Location : 4760937 - 4802186 bp Size : 41250 bp GC content : 47.3 % GC bias (=GCregion - GCgenome) : -3.32 % |
No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
1 | lysU | YP_002410423.1 | 4760937-4762454 | 1518 | - | lysyl-tRNA synthetase | Virulence |
2 | yjdL | YP_002410424.1 | 4762691-4764061 | 1371 | - | putative transporter | - |
3 | cadA | YP_002410425.1 | 4764202-4766349 | 2148 | - | lysine decarboxylase 1 | Virulence |
4 | cadB | YP_002410426.1 | 4766429-4767763 | 1335 | - | lysine/cadaverine antiporter | Virulence |
5 | cadC | YP_002410427.1 | 4768129-4769667 | 1539 | - | DNA-binding transcriptional activator CadC | - |
6 | NA | YP_002410428.1 | 4770471-4771319 | 849 | - | hypothetical protein | - |
7 | NA | YP_002410429.1 | 4771394-4771720 | 327 | + | transposase ORF A, IS629 | - |
8 | NA | YP_002410430.1 | 4771720-4772607 | 888 | + | transposase ORF B, IS629 | - |
9 | NA | YP_002410431.1 | 4772610-4772873 | 264 | - | hypothetical protein | - |
10 | NA | YP_002410432.1 | 4772944-4773789 | 846 | - | hypothetical protein | Virulence |
11 | NA | YP_002410433.1 | 4773874-4774122 | 249 | - | hypothetical protein | Virulence |
12 | yeeW | YP_002410434.1 | 4774089-4774577 | 489 | - | hypothetical protein | Virulence |
13 | yeeV | YP_002410435.1 | 4774574-4774951 | 378 | - | toxin of the YeeV-YeeU toxin-antitoxin system; CP4-44 prophage | Virulence |
14 | yeeU | - | 4775041-4775202 | 162 | - | - | - |
15 | yeeT | YP_002410436.1 | 4775486-4775707 | 222 | - | hypothetical protein | Virulence |
16 | yeeS | YP_002410437.1 | 4775770-4776216 | 447 | - | putative DNA repair protein; CP4-44 prophage | Virulence |
17 | NA | YP_002410438.1 | 4776261-4776746 | 486 | - | putative antirestriction protein | Virulence |
18 | NA | YP_002410439.1 | 4776837-4777655 | 819 | - | hypothetical protein | Virulence |
19 | NA | YP_002410440.1 | 4777745-4777978 | 234 | - | hypothetical protein | Virulence |
20 | NA | YP_002410441.1 | 4777984-4778766 | 783 | - | hypothetical protein | Virulence |
21 | NA | YP_002410442.1 | 4779518-4779673 | 156 | - | hypothetical protein | - |
22 | NA | YP_002410443.1 | 4779692-4780576 | 885 | - | putative GTPase | Virulence |
23 | NA | YP_002410444.1 | 4780677-4781900 | 1224 | + | hypothetical protein | Virulence |
24 | NA | YP_002410445.1 | 4782894-4783220 | 327 | + | transposase ORF A, IS629 | - |
25 | NA | YP_002410446.1 | 4783217-4784107 | 891 | + | transposase ORF B, IS629 | - |
26 | NA | YP_002410447.1 | 4784164-4784337 | 174 | + | hypothetical protein | Virulence |
27 | papI | YP_002410448.1 | 4784680-4784913 | 234 | - | pap operon regulatory protein PapI | Virulence |
28 | NA | YP_002410449.1 | 4785188-4785358 | 171 | + | hypothetical protein | - |
29 | papB | YP_002410450.1 | 4785345-4785659 | 315 | + | pap operon regulatory protein PapB | Virulence |
30 | papA | YP_002410451.1 | 4785833-4786429 | 597 | + | major pilin protein PapA | Virulence |
31 | papH | YP_002410452.1 | 4786493-4787080 | 588 | + | minor pilin protein PapH | Virulence |
32 | papC | YP_002410453.1 | 4787118-4789649 | 2532 | + | outer membrane usher protein PapC | Virulence |
33 | papD | YP_002410454.1 | 4789720-4790454 | 735 | + | Chaperone protein PapD | Virulence |
34 | papJ | YP_002410455.1 | 4790491-4791072 | 582 | + | P pilus assembly protein PapJ | Virulence |
35 | papK | YP_002410456.1 | 4791079-4791618 | 540 | + | fimbrial adapter PapK | Virulence |
36 | papE | YP_002410457.1 | 4791627-4792166 | 540 | + | fimbrial tip protein PapE | Virulence |
37 | papF | YP_002410458.1 | 4792241-4792741 | 501 | + | fimbrial adapter PapF | Virulence |
38 | papG | YP_002410459.1 | 4792785-4793795 | 1011 | + | fimbrial PapG protein | Virulence |
39 | tia | YP_002410460.1 | 4794146-4794901 | 756 | + | Tia invasion determinant | Virulence |
40 | NA | YP_002410461.1 | 4795076-4796575 | 1500 | + | putative membrane-associated, metal-dependent hydrolase | Virulence |
41 | NA | YP_002410462.1 | 4796684-4800211 | 3528 | - | putative superfamily I DNA helicase | Virulence |
42 | int | YP_002410463.1 | 4800651-4801913 | 1263 | - | Prophage integrase | - |
43 | tRNA-Phe | - | 4802111-4802186 | 76 | - | tRNA-Phe | - |