PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Escherichia coli LF82 (NC_011993)
Location : 299507 - 308014 bp
Size : 8508 bp
GC content : 43.7 %
GC bias (=GCregion - GCgenome) : -7.04 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1tRNA-Thr - 299507-299582 76 + tRNA-Thr-
2NA YP_002555226.1 299737-300075 339 + CP4-like integrase-
3NA YP_002555227.1 300510-301034 525 - hypothetical proteinVirulence
4NA YP_002555228.1 301160-305290 4131 - Haemoglobin proteaseVirulence
5NA YP_002555229.1 305603-305800 198 + hypothetical protein-
6NA YP_002555230.1 305883-306098 216 + Insertion element IS1 1/2/3/5/6 protein insA-
7NA YP_006118296.1 306158-306262 105 + hypothetical protein-
8NA YP_002555231.1 306400-306576 177 + InsB protein-
9NA YP_006118297.1 307000-307137 138 + hypothetical protein-
10yagU YP_002555232.1 307400-308014 615 + Inner membrane protein yagU-


tRNA-Thr