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Type: Candidate PAI (PAI-like region overlapping GI(s)) Strain : Pectobacterium carotovorum PC1 (NC_012917) Location : 2522244 - 2545390 bp Size : 23147 bp GC content : 56.5 % GC bias (=GCregion - GCgenome) : 4.54 % |
No | Name | GenBank Accn | Location | Size(bp) | Strand | Product | Putative Virulence / Resistance* |
1 | NA | YP_003017766.1 | 2522244-2522435 | 192 | - | type III secretion lipoprotein | Virulence |
2 | NA | YP_003017767.1 | 2522585-2524654 | 2070 | - | type III secretion outer membrane pore, YscC/HrcC family | Virulence |
3 | NA | YP_003017768.1 | 2524647-2525081 | 435 | - | type III secretion protein | - |
4 | NA | YP_003017769.1 | 2525068-2525292 | 225 | - | HrpF family protein | Virulence |
5 | NA | YP_003017770.1 | 2525433-2526032 | 600 | - | HrpE/YscL family type III secretion apparatus lipoprotein | - |
6 | NA | YP_003017771.1 | 2526069-2526701 | 633 | - | type III secretion protein | - |
7 | NA | YP_003017772.1 | 2526698-2527465 | 768 | - | YscJ/HrcJ family type III secretion apparatus lipoprotein | Virulence |
8 | NA | YP_003017773.1 | 2527472-2527843 | 372 | - | YscI/HrpB family type III secretion apparatus lipoprotein | Virulence |
9 | NA | YP_003017774.1 | 2527910-2528116 | 207 | - | type III secretion protein | Virulence |
10 | NA | YP_003017775.1 | 2528473-2530062 | 1590 | + | EAL domain-containing protein | - |
11 | NA | YP_003017776.1 | 2530145-2531203 | 1059 | - | Fis family sigma-54 specific transcriptional regulator | Virulence |
12 | NA | YP_003017777.1 | 2531571-2532212 | 642 | - | LuxR family two component transcriptional regulator | Virulence |
13 | NA | YP_003017778.1 | 2532249-2533829 | 1581 | - | PAS/PAC sensor signal transduction histidine kinase | Virulence |
14 | NA | YP_003017779.1 | 2533961-2534506 | 546 | - | ECF subfamily RNA polymerase sigma-24 subunit | - |
15 | NA | YP_003017780.1 | 2534834-2536042 | 1209 | + | type III secretion regulator YopN/LcrE/InvE/MxiC | Virulence |
16 | NA | YP_003017781.1 | 2536039-2538141 | 2103 | + | HrcV family type III secretion protein | Virulence |
17 | NA | YP_003017782.1 | 2538151-2539080 | 930 | + | YscD/HrpQ family type III secretion apparatus lipoprotein | Virulence |
18 | NA | YP_003017783.1 | 2539080-2540447 | 1368 | + | type III secretion apparatus H+-transporting two-sector ATPase | Virulence |
19 | NA | YP_003017784.1 | 2540437-2540874 | 438 | + | type III secretion protein | - |
20 | NA | YP_003017785.1 | 2540871-2541416 | 546 | + | type III secretion protein | - |
21 | NA | YP_003017786.1 | 2541413-2542573 | 1161 | + | type III secretion system apparatus protein YscQ/HrcQ | - |
22 | NA | YP_003017787.1 | 2542570-2543223 | 654 | + | Yop virulence translocation R | Virulence |
23 | NA | YP_003017788.1 | 2543231-2543491 | 261 | + | type III secretion protein, HrpO family | Virulence |
24 | NA | YP_003017789.1 | 2543498-2544298 | 801 | + | type III secretion protein SpaR/YscT/HrcT | Virulence |
25 | NA | YP_003017790.1 | 2544311-2545390 | 1080 | + | YscU/HrpY family type III secretion protein | Virulence |