PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Escherichia coli Escherichia coli BL21-Gold(DE3)pLysS AG (NC_012947)
Location : 3247086 - 3255085 bp
Size : 8000 bp
GC content : 45.6 %
GC bias (=GCregion - GCgenome) : -5.28 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1NA YP_003037306.1 3247086-3247457 372 + excisionaseVirulence
2NA YP_003037307.1 3247313-3248476 1164 + integrase-
3tRNA-Arg - 3248492-3248568 77 - tRNA-Arg-
4NA YP_003037308.1 3248811-3249443 633 + transcriptional regulator FimZVirulence
5NA YP_003037309.1 3249446-3249961 516 - fimbrial proteinVirulence
6NA YP_003037310.1 3249972-3250949 978 - P pilus assembly protein pilin FimA-like proteinVirulence
7NA YP_003037311.1 3250991-3253600 2610 - fimbrial biogenesis outer membrane usher proteinVirulence
8NA YP_003037312.1 3253631-3254323 693 - Pili assembly chaperone, N-terminalVirulence
9NA YP_003037313.1 3254543-3255085 543 - fimbrial proteinVirulence


tRNA-Arg