PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Escherichia coli REL606 (NC_012967)
Location : 4512575 - 4530624 bp
Size : 18050 bp
GC content : 46.1 %
GC bias (=GCregion - GCgenome) : -4.64 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1yjhP YP_003047336.1 4512575-4513321 747 - putative methyltransferase-
2yjhQ YP_003047337.1 4513377-4513922 546 - putative acetyltransferase-
3NA YP_003047338.1 4513934-4514191 258 - hypothetical protein-
4yjhR - 4515153-4516169 1017 + --
5yjhS YP_003047339.1 4516752-4517732 981 - hypothetical protein-
6yjhT YP_003047340.1 4517797-4518903 1107 - N-acetylneuraminic acid mutarotase-
7yjhA YP_003047341.1 4518923-4519639 717 - N-acetylnuraminic acid outer membrane channel protein-
8insB-27 YP_003047342.1 4521586-4522089 504 - IS1 protein InsB-
9insA-27 YP_003047343.1 4522008-4522283 276 - IS1 protein InsA-
10fimE YP_003047344.1 4522951-4523547 597 + tyrosine recombinaseVirulence
11fimA YP_003047345.1 4524029-4524577 549 + major type 1 subunit fimbrin (pilin)Virulence
12fimI YP_003047346.1 4524642-4525181 540 + type 1 pilus biosynthesis fimbrial proteinVirulence
13fimC YP_003047347.1 4525218-4525943 726 + chaperoneVirulence
14fimD YP_003047348.1 4526010-4528646 2637 + outer membrane usher protein, type 1 fimbrial synthesisVirulence
15fimF YP_003047349.1 4528656-4529186 531 + minor component of type 1 fimbriaeVirulence
16fimG YP_003047350.1 4529199-4529702 504 + minor component of type 1 fimbriaeVirulence
17fimH YP_003047351.1 4529722-4530624 903 + minor component of type 1 fimbriaeVirulence