PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Escherichia coli REL606 (NC_012967)
Location : 530320 - 538349 bp
Size : 8030 bp
GC content : 45.6 %
GC bias (=GCregion - GCgenome) : -5.2 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1sfmA YP_003043706.1 530320-530862 543 + putative fimbrial-like adhesin proteinVirulence
2sfmC YP_003043707.1 531082-531774 693 + pilin chaperoneVirulence
3sfmD YP_003043708.1 531805-534414 2610 + putative outer membrane export usher proteinVirulence
4sfmH YP_003043709.1 534456-535433 978 + putative fimbrial-like adhesin proteinVirulence
5sfmF YP_003043710.1 535444-535959 516 + putative fimbrial proteinVirulence
6fimZ YP_003043711.1 535962-536594 633 - transcriptional regulator FimZVirulence
7tRNA-Arg - 536837-536913 77 + tRNA-Arg-
8intD YP_003043712.1 536929-538092 1164 - putative integrase-
9NA YP_003043713.1 537948-538349 402 - ExcisionaseVirulence


tRNA-Arg