PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Escherichia coli BL21(DE3) (NC_012971)
Location : 4440940 - 4458989 bp
Size : 18050 bp
GC content : 46.1 %
GC bias (=GCregion - GCgenome) : -4.7 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1yjhP YP_003056726.1 4440940-4441686 747 - methyltransferase-
2yjhQ YP_003056727.1 4441742-4442287 546 - acetyltransferase-
3NA YP_003056728.1 4442299-4442556 258 - hypothetical protein-
4yjhR - 4443518-4444534 1017 + --
5yjhS YP_003056729.1 4445117-4446097 981 - hypothetical protein-
6yjhT YP_003056730.1 4446162-4447268 1107 - hypothetical protein-
7yjhA YP_003056731.1 4447288-4448004 717 - N-acetylnuraminic acid outer membrane channel protein-
8fimB - 4449460-4450838 1379 + --
9insB-27 YP_003056732.1 4449951-4450454 504 - IS1 protein InsB-
10insA-27 YP_003056733.1 4450373-4450648 276 - IS1 protein InsA-
11fimE YP_003056734.1 4451316-4451912 597 + tyrosine recombinase/inversion of on/off regulator of fimAVirulence
12fimA YP_003056735.1 4452394-4452942 549 + major type 1 subunit fimbrin (pilin)Virulence
13fimI YP_003056736.1 4453007-4453546 540 + fimbrial protein involved in type 1 pilus biosynthesisVirulence
14fimC YP_003056737.1 4453583-4454308 726 + chaperone, periplasmicVirulence
15fimD YP_003056738.1 4454375-4457011 2637 + outer membrane usher protein, type 1 fimbrial synthesisVirulence
16fimF YP_003056739.1 4457021-4457551 531 + minor component of type 1 fimbriaeVirulence
17fimG YP_003056740.1 4457564-4458067 504 + minor component of type 1 fimbriaeVirulence
18fimH YP_003056741.1 4458087-4458989 903 + minor component of type 1 fimbriaeVirulence