PAI-like Region

• General information

Type: Candidate PAI (PAI-like region overlapping GI(s))
Strain : Escherichia coli BL21(DE3) (NC_012971)
Location : 527299 - 535328 bp
Size : 8030 bp
GC content : 45.6 %
GC bias (=GCregion - GCgenome) : -5.26 %


• Features

*Putative virulence or resistance of a gene was inferred from the result of BLAST search against PAI or REI genes.
  Virulence : homologous to virulence gene(s) encoded in the PAIs
  Resistance : homologous to resistance gene(s) encoded in the REIs
  - : not homologous to any gene encoded in the PAIs

No Name GenBank Accn Location Size(bp) Strand Product Putative Virulence / Resistance*
1sfmA YP_003053150.1 527299-527841 543 + fimbrial-like adhesin proteinVirulence
2sfmC YP_003053151.1 528061-528753 693 + pilin chaperone, periplasmicVirulence
3sfmD YP_003053152.1 528784-531393 2610 + outer membrane export usher proteinVirulence
4sfmH YP_003053153.1 531435-532412 978 + fimbrial-like adhesin proteinVirulence
5sfmF YP_003053154.1 532423-532938 516 + fimbrial-like adhesin proteinVirulence
6fimZ YP_003053155.1 532941-533573 633 - DNA-binding transcriptional regulatorVirulence
7tRNA-Arg - 533816-533892 77 + tRNA-Arg-
8intD YP_003053156.1 533908-535071 1164 - integrase-
9NA YP_003053157.1 534927-535328 402 - ExcisionaseVirulence


tRNA-Arg